Pantoea sp. At-9b: Pat9b_3862
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Entry
Pat9b_3862 CDS
T01386
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pao
Pantoea sp. At-9b
Pathway
pao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Pat9b_3862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pao03400
]
Pat9b_3862
Enzymes [BR:
pao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pat9b_3862
DNA repair and recombination proteins [BR:
pao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pat9b_3862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA-like_WH
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_22
AAA_19
Zn_ribbon_6
TrwB_AAD_bind
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ADU71152
UniProt:
E6WAF3
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All DBs
Position
4221606..4223882
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AA seq
758 aa
AA seq
DB search
MTQMDIRSPRQRVHYFSLLQNRIEKVMPVVQVALPVPLPRLFDYLLPADAPLPVTGVRVS
VPFGNRKMVGIVVGVQETSDLPLTQLKQIEAVLDDSSLYSPALWRILQWAAHYYHSPLGE
VLNHALPVLLRQGKPAQEAPLWQWVINDAGREVALDSLKRARKQQQALAALRQQPLYRHQ
ISDHDLTDAALQALRAKGLCDLREHAAPLHDWRDTFAVKGERLRLNTDQAMAVGAIRSED
DRYAAWLLAGITGSGKTEVYLSVLENVLARGKQALVLVPEIGLTPQTIARFRERFDAPID
VLHSALNDSERLAVWLRARSGETAIVIGTRSALFTPLARPGVIIIDEEHDSSYKQQEGWR
YQARDLAVFRAHEEDIPIVMGSATPALETLHNVRNGKYRQLNLTKRAGNAKPALQQLLDL
KGQQLKGGLAPALLGKMRQHLQANNQVLLFLNRRGFSPALMCHDCGWLAECQRCDRYYTL
HQHHRQLRCHHCDSQRPLPHQCPQCGSTHLMPVGVGTEQLEQQLGTLFPGVPVSRIDRDT
TSRKGALEQHLADVHRGGARILVGTQMLAKGHHFPDVTLVSLLDVDGALFSADFRAAERF
AQLYTQVAGRAGRAGKQGEVLLQTHHPEHPLLQTLLHRGYFAFAEQTLLERQSVHLPPWT
SHALFRAEDMDNQQAAEFLNQLRNLLEASPLKDQALWLMGPVPALQPKRSGRWRWQLLLQ
HPSRKRLQQLLSSSLPLITTLPAARKVKWTLDIDPTES
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagatggatatccgctcgccgcgccagcgtgtacactacttctccttattacag
aaccggatagagaaagtcatgcccgttgttcaggttgccctgcccgttccgctgcctcgc
ctgtttgactacctgctgcctgccgatgcgccgctgccggtaacaggcgtgcgcgtcagc
gtgccgtttggcaaccggaaaatggtcggcattgtggtgggcgtgcaggaaaccagcgac
ctgcccctgacgcaactgaagcagattgaggcggtgctggatgacagcagcctctattcg
cccgcgctgtggcgcattttgcagtgggcggcgcactattatcactccccgctcggcgag
gtgttgaaccatgcattgccggtgctgttgcgtcagggaaaaccggcgcaggaagcgccg
ctgtggcaatgggtgatcaatgacgccgggcgtgaagtggcgctggatagcctgaaacgc
gcccgcaaacagcagcaagcgttggcggcactgcgccagcagcccctctatcggcatcag
atcagcgaccatgatctcaccgatgcggccttgcaggcgctgcgtgccaaaggtttgtgt
gatctgcgtgagcacgctgcgcctttacacgactggcgggacacgtttgccgttaaaggt
gagaggttgcgcctcaataccgatcaggcgatggcggtcggcgcgattcgcagcgaagac
gatcgctacgccgcctggctgctggccggcatcaccggttcgggtaaaaccgaggtctat
ctcagcgtgctggaaaacgtgctggcacgcggtaagcaggcgttggtgctggtgccggaa
attggcctgacgccacagactatcgcccgctttcgcgaacgtttcgatgcaccgattgat
gtgctgcactcggcgctgaatgatagcgaacgcctcgccgtctggctgcgggcgcgcagt
ggcgaaaccgccattgtgattggcacccggtcagcgctgtttacaccgctggcgcggccc
ggcgttatcatcattgatgaagaacacgacagttcctataaacaacaggaaggctggcgc
tatcaggcgcgtgacctggcggtgttccgcgcgcatgaggaagatatcccgatcgtgatg
ggatcggccacacccgcactggaaacgctgcataacgtgcgcaatggcaaatatcgtcag
ctcaacctgaccaaacgcgccggtaacgccaaaccggcgttgcagcaattgcttgacctg
aaagggcaacagcttaaaggcggtctggctccggcgctgctgggaaaaatgcgccagcat
ttacaggcgaacaatcaggttctgttgttcctgaatcggcgcggtttctcccctgcgctg
atgtgccatgactgcggctggctggctgagtgccaacgctgcgatcgttattacacgctg
caccagcaccaccgtcagctgcgttgccaccactgcgacagccagcgcccgttgccgcac
cagtgtccccaatgtggatcgacccacttgatgccggtcggcgtcggaaccgagcagttg
gaacagcaactcggcacgctgtttcctggcgtgccggtctcgcgcatcgaccgtgatacc
accagccgcaagggcgcgttggagcaacatctggcggatgtgcatcgtggcggcgcacgc
atcctggtgggtacgcagatgctggctaaagggcaccactttccggatgtcacgctggtt
tcgctgctggatgtcgatggcgcgctgttctcggctgatttccgtgccgctgagcgtttt
gcccaactctatactcaggtcgcgggccgtgcgggtcgtgcgggcaagcagggcgaagta
ctgctgcaaacgcaccacccggaacatccgctgctgcaaaccctgctgcatcgcggctat
tttgcctttgccgagcagacgttgctggagcgccagtccgtgcatctgccaccgtggacc
agccatgcgttgtttcgcgccgaagatatggataaccagcaggctgccgagttccttaac
cagttacgcaatttgctcgaagccagcccgttgaaagatcaggcgctatggctgatgggg
ccggttccggcattgcaacccaagcgcagcggacgctggcgctggcaactgctgctgcaa
catccctcgcgcaaacggctgcaacagctgctcagcagttcgctgccgctgatcaccacg
ctacccgccgcgcgtaaagtcaaatggacgctggatatcgacccgaccgagagctga
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