Pantoea sp. At-9b: Pat9b_4193
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Entry
Pat9b_4193 CDS
T01386
Name
(GenBank) transcriptional regulator, DeoR family
KO
K02430
DeoR family transcriptional regulator, L-fucose operon activator
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pao03000
]
Pat9b_4193
Transcription factors [BR:
pao03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
Pat9b_4193
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
GntR
HTH_11
MarR_2
MarR
HTH_24
E3_UFM1_ligase
HTH_Crp_2
Penicillinase_R
HTH_20
HTH_5
HTH_36
PaaX
HTH_PafC
TrmB
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ADU72757
UniProt:
E6WMX2
LinkDB
All DBs
Position
pPAT9B04:66208..67047
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AA seq
279 aa
AA seq
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MLPIERHRQIMEELNLHGRVLVAELVKLCRVSQETIRRDLSQLEKKGLLQRSHGGAVMAQ
KHQGNLAGKNNKPNEYESTFRLRMNENTQAKTLIAKRALDFITPGDCILLDSSTTCWFLA
RQLPDIELTVLTNSLRIVQTLAAKGHIRTICLGGEYSDHNEDFNGIVAEQPLKDYLINKI
FFSCSSLGNDGYLRAANENNAHLKQQMLMASERKYLLIDAGKFLRPSFARICHYREVDFL
ITDSLKDKELQQELAWNGVNIIDCSQRQNVMQLMNSQDI
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgattgagcgtcaccgtcagatcatggaagaattaaatttacatggtcgggta
ttggttgcagaactggttaaactttgtcgggtttctcaggaaaccatacgcagggattta
tctcagttagagaagaaaggattattacaacgcagtcacggcggtgcggtgatggcgcag
aaacaccaggggaatttggcaggaaaaaataataaaccgaacgaatatgaatccaccttt
cgcctgcggatgaatgaaaacacccaggccaaaacattaatcgccaaaagggcgctcgat
tttattacgccgggcgattgtatattactggatagcagcaccacctgttggtttttggca
cggcagttgccagatatcgagctaacggtgctgacaaactcactgcgcatcgtgcagacg
ctggccgccaaaggccatatccgcaccatctgtctgggaggagagtattccgatcataat
gaagattttaatggcattgttgctgagcagccgctgaaagattatttaatcaacaaaata
tttttctcctgtagcagtttgggtaacgacggatatttgcgtgcagccaatgaaaataat
gcacatttaaaacaacaaatgttaatggcatcagaaaggaaatatctgctgatcgatgca
gggaaattccttcgtccttcttttgcccgaatttgccactaccgtgaagtggatttttta
ataaccgatagtctgaaagataaagaattacaacaggagctggcctggaacggcgtcaat
attatcgattgttcacaacgccagaatgtcatgcaattaatgaactctcaggatatttaa
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