Pantoea sp. At-9b: Pat9b_4245
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Entry
Pat9b_4245 CDS
T01386
Name
(GenBank) transcriptional regulator, LacI family
KO
K03487
LacI family transcriptional regulator, asc operon repressor
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pao03000
]
Pat9b_4245
Transcription factors [BR:
pao03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Pat9b_4245
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_31
HTH_IclR
TetR_N
HTH_38
HTH_26
MarR_2
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ADU72809
UniProt:
E6WN24
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Position
pPAT9B04:complement(121592..122605)
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AA seq
337 aa
AA seq
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MITMLDVAQRAGVSKATVSRVLAGHSYVSKTVRDKVMQAVDEMGYRPNLVARNLATNRSH
SIGLMVPNTLYHGPFFSELMFQVATLTEQLGSQLVLADGKHNAQQERDAIHFLIDSRCDA
VIIYPRYLSVEEIDALIPTLSKPLIILNRRLKKFPQYSVCADHEKDTCDAVNYLIRRGHR
DIAFIKGMGSSHTGLSRLKGFQAAMTQNNLPMAPALMLDGCWTMESGKRAAEELLARNVT
FSAIVASNDDMAIGAASALHNAGKRMPQDVSLLSFDDIPMASYTIPALTSVHVPMAEMVS
NALAQLTKMLDGEEVAALPLMCGELIHRQSVCDGPYA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgattaccatgcttgatgttgcccaacgcgcaggcgtttcgaaggcaaccgtatcccgc
gtactggccggacacagttatgtgtccaaaacggtgcgcgacaaagtgatgcaggcagtt
gacgagatgggctatcgccccaatctggtggcgcgtaacctggcgaccaaccgttcgcat
agcattggtctgatggtgcccaacaccctgtatcatgggccgtttttcagcgaactgatg
tttcaggtggcgaccctgaccgagcaacttggctcccaactggtattggccgatggtaaa
cacaatgcgcaacaagaacgcgacgcgattcatttcctcatcgacagccgttgtgatgcg
gtgatcatttacccacgctacctgagcgtggaagaaatcgacgcattgatccccaccctg
agcaaaccgctgatcatcctgaaccgtcgcttaaaaaaattcccccaatattccgtttgt
gccgaccatgagaaagacacttgcgatgcggtgaactatttgattcgccgtggacatcgc
gatatcgcgtttatcaaagggatgggcagttcacacaccggcctcagccgtttgaaaggg
ttccaggccgccatgacccagaataatttgccgatggcaccggcgttaatgctggatggg
tgctggaccatggaaagcggtaagcgagccgccgaggaattgctggcacgcaacgtgaca
ttctcggcgattgtcgccagtaacgacgatatggctatcggagccgcctctgccctgcac
aatgcgggcaagcggatgccgcaggatgtctccctgctcagtttcgatgatattccaatg
gcgtcctacaccattccggcgctgacatcggtgcatgtcccgatggccgaaatggtctcc
aacgccctggcgcaactcacgaaaatgctggatggtgaagaggttgccgcgctgcccctg
atgtgtggcgaattaatccatcgacaatcggtctgtgatggtccgtatgcctga
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