Pantoea sp. At-9b: Pat9b_4704
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Entry
Pat9b_4704 CDS
T01386
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
KO
K02584
Nif-specific regulatory protein
Organism
pao
Pantoea sp. At-9b
Pathway
pao02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Pat9b_4704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pao03000
]
Pat9b_4704
Transcription factors [BR:
pao03000
]
Prokaryotic type
Helix-turn-helix
Other families
Pat9b_4704
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF_2
AAA_5
AAA
Mg_chelatase
AAA_2
AAA_3
MCM
AAA_16
HTH_23
Parvo_NS1
AAA_7
TIP49
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
ADU72673
UniProt:
D1KS48
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All DBs
Position
pPAT9B03:complement(303628..305199)
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AA seq
523 aa
AA seq
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MTQQFESDNRVWRFDLSQQFTAMQRLSVVLSRSTERDRTLQDVLYVLHNDAFMQHGMICL
SDSQQDLLTIAALPEADVQQLTDGLKVRYRIGEGLVGTVVSQGQSLVLPRLADDPRFLDR
LGLYDYNLPFIAVPLMGPDSKPIGVLAAQPMAQAESRLTSCTRFLETVANLVAQTVRLLS
SPLPSVPRPAVIAAAKGRNCVPAHNFGFENMVGKSPAMQQTLDIIRQVSRWDTTVLVRGE
SGTGKELIANAIHHNSPRSTFPFVKFNCAALPDTLLESELFGHEKGAFTGAVRQRKGRFE
LADGGTLFLDEIGESSASFQAKLLRILQEGEMERVGGDETLQVNVRIIAATNRNLEEEVR
NGNFREDLYYRLNVMPVSLPPLRERQDDIPELAHFLVRKIGQHQHRTLRISEGAIRLLLS
YNWPGNVRELENCLERSAVMSDSGLIDREVILFNHRETVPKPLAVSAPREDSWLDQNLDE
RQRLIAALEKAGWVQAKAARLLGMTPRQVAYRIQTMDITMPRI
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcaatttgaatccgacaaccgggtttggcgttttgatctgtcccaacagttt
accgcgatgcaacgccttagcgtggtgttgagtcgctcgacggagcgagatcggacatta
caggacgtgttgtacgtactgcataatgatgcatttatgcagcatggcatgatttgcctg
agcgacagtcaacaggacctgctgaccatcgcggcgctaccggaggccgacgtgcaacaa
ctgaccgatggcctgaaagtccgttatcgtatcggagaggggctggttggtacggtggtg
tctcaggggcaatcgttggttttgccgcgactggcagatgacccacgtttccttgatcgc
ctgggattgtacgactacaacctgcccttcattgccgtgccgctgatggggccagactca
aaaccgattggggttttggccgcccaaccgatggcgcaggctgaatcacggctcacctcc
tgtacccgctttcttgaaactgtcgccaatctggtagcgcagacggtgcgcctgctgtca
tcaccacttccttccgttccacgtccggcagtgatagccgccgccaaggggcgcaactgt
gttcctgcccacaacttcggcttcgaaaatatggtgggaaagagcccggcgatgcagcag
acactggacattattcggcaggtctcacgctgggataccacggtgttggtgcggggtgaa
agtgggactggtaaggaattaattgccaacgccattcatcataattccccgcggtccacc
ttcccttttgtgaagtttaactgtgcggctttgcccgacaccctgcttgagagtgaactt
tttggtcatgagaaaggcgcgtttaccggggcagtgcgtcagcgaaaaggacgttttgaa
ctggcagatggtggcacgcttttccttgatgaaattggtgaaagcagcgcctcttttcag
gctaaattgttgcggatattacaggaaggagaaatggaacgggtcggtggtgatgaaacc
cttcaggtcaatgtacggatcatcgccgcgaccaaccgcaacctggaggaagaggtacgc
aacgggaatttccgcgaagacctgtattaccgcctgaacgtgatgccggtctctcttcct
ccgctgcgtgaacggcaggatgatattcctgaactggcacactttctggtacgcaaaatc
gggcaacaccagcaccgcactctgcggatcagtgaaggggcaattcgcctgctgctgagt
tacaactggccgggtaatgtgcgcgaactggaaaactgtctggaacgttcggcggtgatg
tcggatagcgggttaattgatcgtgaggtgatcctgttcaatcaccgggaaacagtaccg
aaaccgctggcggtcagcgcaccacgcgaggacagttggcttgatcagaatcttgatgaa
cgccagcggctgatcgctgcgctggaaaaagccgggtgggtgcaggccaaagcggcgcgt
ttattggggatgacaccacgtcaggttgcctatcgcatccagacgatggatatcaccatg
ccacgcatctga
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