Pantoea sp. At-9b: Pat9b_5498
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Entry
Pat9b_5498 CDS
T01386
Name
(GenBank) transcriptional regulator, TetR family
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pao03000
]
Pat9b_5498
Transcription factors [BR:
pao03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Pat9b_5498
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_N
TetR_C_3
TetR_C_29
HTH_32
TetR_C_21
Motif
Other DBs
NCBI-ProteinID:
ADU71654
LinkDB
All DBs
Position
pPAT9B01:complement(347342..348004)
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AA seq
220 aa
AA seq
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MTAQKVPSEGKSAKSEPRRPGRPRGGAINAQQREHLLDITLSLYAEHGIAETSLNAIARK
AGVSPAMLNYYFKSREALLDVVVEERFLPLRQRLVAHFVNEPRDPVTTFSAFIREIADII
ATHHWFGPLWMQEVTEGQGGLGQHIKHRFGHAERDKVKSLIEGWQQQGLLNPDLEPQLLM
TSILSMVLVPFTRFANDPAFNREKIVAHTLSLFCRGIRPE
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacagaaagtcccttctgagggaaaatcagcaaaatccgaaccccgtcgtccc
ggccgtccccggggtggcgcgatcaatgcgcaacagcgggaacatttactggatatcacc
ctgtcgctgtatgccgaacacggcattgcggaaacttccctcaacgccattgcacgtaag
gcgggcgtcagtccggccatgttgaattattacttcaagtcgcgggaagccctgctggat
gtggtggttgaggagcgttttttgccgctgcgtcagcgtctggtggcgcattttgtcaat
gaaccgcgtgaccctgtcaccaccttcagcgcctttattcgtgagattgccgacatcatc
gccacccatcactggtttggaccgttatggatgcaggaagtgacggagggccagggggga
ttaggccagcatatcaaacaccgcttcggtcatgccgagcgcgataaggtgaaaagcctg
attgagggctggcagcaacagggactgctgaacccggatctggaaccgcagctactgatg
acgtcaattctcagtatggtgctggtgcccttcacgcgctttgccaacgatccggcgttc
aaccgtgaaaagattgtcgcgcatacattgagtttgttttgccgtgggatcaggccggaa
tag
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