Pantoea sp. At-9b: Pat9b_5644
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Entry
Pat9b_5644 CDS
T01386
Name
(GenBank) glycosyl transferase family 39
KO
K07264
4-amino-4-deoxy-L-arabinose transferase [EC:
2.4.2.43
]
Organism
pao
Pantoea sp. At-9b
Pathway
pao00540
Lipopolysaccharide biosynthesis
pao01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Pat9b_5644
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Pat9b_5644
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pao01005
]
Pat9b_5644
Enzymes [BR:
pao01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.43 lipid IVA 4-amino-4-deoxy-L-arabinosyltransferase
Pat9b_5644
Lipopolysaccharide biosynthesis proteins [BR:
pao01005
]
Lipid A
Pat9b_5644
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PMT
PMT_2
Motif
Other DBs
NCBI-ProteinID:
ADU71800
UniProt:
E6WIX0
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All DBs
Position
pPAT9B01:complement(506345..507994)
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AA seq
549 aa
AA seq
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MRTGTKTALLLFVFALYYLIPIEFRALWQPDETRYAEISREMLANGNWVTPHFFGLRYFE
KPIAGYWVNNLGQLLFGHNNFGVRAGSIFSTILSALLVYWMGIRLFANRTVALNACIIFL
TSLLVYGVGTYAVLDPILTLWMVAAMASYCLAAQASTSGQRVLGYVLLGVACAMGFMTKG
FLALAVPVLAIVPWAVAQRRFGELLRFGPLTILVAALVSAPWSLAIYRQEGDFWHYFFWV
EHIQRFAEDDAQHKAPFWYYLPILLAGSLPWLGLLPGSLVQGWRQRGQQPGLSYLLSWTL
LPLLFFSIAKGKLPTYILPCFAPLALLMAHYTQSMTPHVVKALKVNAWINMFFGGVAAVA
LAVVLAPWGLAHRPPFGVTEHYKLMLGILAFGGWTLFGALSKKNWQLAACCPLILALVIG
FAIPDRIRDSKQPQNFVAAVSGQLADSRYILANDPGIASAVAWELQRNDIRFYERKGEVG
YGLDYPDAQDRYISANDFPAWLAQHRKQGKVSVAMIMSSADANPDTRLPKPDFVYRQGRL
VYFGYDAQP
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactggtactaaaacggccctgctgctgtttgtttttgcgctttactaccttatc
cccatcgaattccgcgcgttatggcaacctgatgaaacccgttatgcggagatcagccgt
gaaatgctcgccaacggtaattgggtgacaccgcatttttttggcctgcgttatttcgaa
aaacctatcgccggttactgggtgaataatctcggtcagttgttgtttggtcacaacaat
tttggtgtgcgcgcggggtctattttcagcactatcctcagtgcgctgctggtgtactgg
atgggcatccggctgttcgctaaccgcacggttgcgctgaacgcctgcatcatctttctt
acctcgttgctggtttacggagtgggcacctatgcggtgctggacccgatactgacgctg
tggatggtggcagcgatggcgagttactgcctggcagcgcaggccagcacttcaggccag
cgtgtgttgggttatgtgctactgggcgtcgcctgtgcgatggggtttatgaccaaaggg
ttcctcgcgttagcggtgccggttctggccattgttccctgggcggtggcgcaacgtcgc
tttggtgagctgctgcggtttggtccgttaacgatcctggtcgcggcgctggtgagtgcc
ccgtggtcgctggcgatttatcgtcaggaaggggatttctggcactatttcttctgggtt
gagcacattcagcgtttcgccgaagatgacgcgcaacacaaagcaccattctggtattac
ctgccgattctgctggccggctccttgccgtggctgggattgctgcctggctcactggta
cagggttggcgtcagcgtggtcaacagccggggttaagctatttgctcagttggaccttg
ctgccgctgctgtttttcagtattgccaaaggcaagttgccgacttatatcctgccgtgc
tttgcgccgctggcgctgctgatggcgcactatacccagagcatgacgccacacgtggtc
aaagcgctgaaggtcaatgcgtggatcaatatgttttttggtggcgttgccgccgtggcg
ctggcagtggtgctggccccatggggactggcgcaccgtccgccgtttggggtgacggaa
cattataagttgatgctggggatcctggccttcggtggctggacgctgtttggtgccctg
agcaagaaaaactggcaactggctgcctgctgcccattgatactggcgctggtgatcggt
tttgccattccggatcggatacgtgacagtaaacagccacaaaactttgtcgcggcagtt
tccgggcagttggcggacagccgctatattctggcaaacgacccggggattgcctcggca
gtggcgtgggaattgcagcgcaatgatattcgcttctacgaacgtaaaggtgaagtcggc
tatggccttgactatcctgatgcgcaagatcgttatatctccgctaacgattttcccgcc
tggctggcgcaacatcgcaaacagggaaaagtctcagtggcgatgatcatgtcttctgcc
gatgccaacccggatacgcgcctaccgaaacctgactttgtctatcgtcaggggcggttg
gtgtatttcggctacgatgcgcagccatga
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