Pantoea sp. At-9b: Pat9b_5716
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Entry
Pat9b_5716 CDS
T01386
Name
(GenBank) histone family protein nucleoid-structuring protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pao03036
]
Pat9b_5716
03400 DNA repair and recombination proteins [BR:
pao03400
]
Pat9b_5716
Chromosome and associated proteins [BR:
pao03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
Pat9b_5716
DNA repair and recombination proteins [BR:
pao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Pat9b_5716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
Saf4_Yju2
MutS_III
Motif
Other DBs
NCBI-ProteinID:
ADU71872
LinkDB
All DBs
Position
pPAT9B01:582638..583039
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AA seq
133 aa
AA seq
DB search
MSDALKALNNLRTLRAQARDIEVEVLNEMLEKLSAVIAERREEAAAENAAQREKEEKLAL
YKEMLLNDGIDINELAQLTQGESKPKAKRAQRPAKYKFTDENGEEKFWTGQGRTPSPIKS
ALDAGGSLDDFLI
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgcactgaaggcattgaacaatcttcgtacactgcgtgcccaggcgcgtgat
attgaggttgaagttttaaacgaaatgctggaaaagctcagcgcggtgatcgccgaacgt
cgtgaagaagcggctgcggaaaatgcggctcagcgcgagaaagaagaaaaactggcgctg
tataaagaaatgctgcttaacgacggtattgatattaatgaactggcgcaattaacccag
ggtgaaagcaaacctaaagcaaaacgcgcccaacgtccggcgaaatataagttcaccgat
gaaaacggcgaagagaaattctggaccggccagggtcgcaccccttccccgatcaaaagc
gcacttgacgctggcggttcgttggatgatttcctgatctaa
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