Pantoea sp. At-9b: Pat9b_5778
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Entry
Pat9b_5778 CDS
T01386
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pao03000
]
Pat9b_5778
Transcription factors [BR:
pao03000
]
Prokaryotic type
Helix-turn-helix
Other families
Pat9b_5778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
GAF_3
AAA_5
AAA_19
HTH_8
AAA
Mg_chelatase
AAA_16
AAA_7
HTH_50
AAA_2
bpMoxR
DUF815
CSN4_RPN5_eIF3a
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ADU71934
UniProt:
E6WJA4
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All DBs
Position
pPAT9B01:complement(654203..656281)
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AA seq
692 aa
AA seq
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MAYTPMSDIGQQGLFEITQTLLQQPDLGALANCLTKLAKQGALADRVNVLLYHPLHTQVS
FYGMDNPANEQNLEQEKILATGPMQRILSRPEALICQWHEFGESWPQVARLPLYPAFGRY
CLLPLVVSGEIFGGCEFIRNRDTGWSEQELERLHTLTQVAGLCAQQIRSTQDIDHHCQVL
SRERDDFRILVAVTNAVLSKLDLDEVMQETAREIHRHFAIDSISIVVRSSRKAWLTIYST
HFVDETSPIHDLSDVPEAGTLSEQVFASGETLLLNLYPDAQAASYERRLLELWDNQIQTL
CLMPLKFGDNMLGVMKLAQCGERGFSAANLELLQQIAERIAIALDNALAWQEINRLKESL
TDRNPWVTESINAGGSEAGEIIGRSEVMMNVLKQVDIVAASDSTVLILGETGTGKELIAR
AIHSQSQRNRHRMVKMNCAAMPAGLLESDLFGHERGAFTGANTQRIGRFELADKSSLFLD
EVGDMPLELQPKLLRVLQEKEFERLGSNKLQTVDVRLIAATNRDLRQMVADREFRNDLYY
RLNVFPIRLPPLRERPEDIPLLVKALTFKIAHRLNRKIDSIPAETLSMLRRMEWPGNVRE
LENVIERAVLMTRGNVLHLSLPEMADASPVRKVAAPVTEPRAGEDEYQLIMRVLRETNGV
VAGPRGAAQRLGIKRTTLLSRMKRLGINKVES
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcatataccccgatgagcgatatcgggcagcagggattgtttgaaataacacaaaca
ctgctgcaacagcccgatttaggtgcgctcgctaattgcctgacaaaactggccaaacaa
ggggcattagcggatcgcgtaaatgtactgctttatcatccattgcatacgcaggtcagt
ttttatggcatggataatccggcaaatgagcagaacctggaacaggagaagatactggcc
accgggccaatgcaacgtattctttcccgtccagaggcgctgatttgtcagtggcatgag
ttcggagagagctggccgcaggtggccagactgccgctttaccccgcttttggtcgttac
tgtctgctgccgctggttgtcagtggcgagattttcggcggctgtgagttcattcgcaac
cgcgatacgggctggagcgagcaagagctggagcgtctgcatacgctgacccaggtggcg
gggttgtgcgcgcagcagattcgcagcacgcaagatatcgatcaccactgtcaggtgctg
agccgtgagcgcgatgattttcgcattctggtggcggtaaccaatgcggtgctgtcaaaa
ctcgatctcgacgaggtgatgcaggaaacggcgcgggaaatccaccgccattttgccatc
gattctatcagcattgtggtgcgcagcagccgtaaagcgtggctgacgatctactcaacc
cattttgttgatgaaacgtcgccgatccatgatctgagtgacgtgcccgaagcaggcacg
ctgtctgaacaggtttttgccagtggcgaaacgctgttgcttaatctgtatcccgacgct
caggcggcctcctatgagcgccggttactggagctttgggataatcaaattcagacgctg
tgcctgatgccgctgaaatttggtgacaatatgttgggggtgatgaaactggcgcagtgc
ggggaacggggattcagcgcggccaatcttgaactgctgcaacaaattgccgaacgcatt
gcgattgcgctggataacgcgctggcatggcaggagatcaaccggctgaaggaaagcctg
accgacagaaatccgtgggtgacggagtcgatcaacgccggaggcagtgaggcgggggag
attattggccgcagcgaagtgatgatgaatgtgctgaaacaggtcgacattgtggccgcc
agtgacagcaccgtgttgatccttggcgaaaccggcacgggaaaagagttgattgcccgc
gccattcacagccagagccagcgtaatcgtcaccgcatggtaaaaatgaactgcgccgcc
atgcctgccgggttgctggaaagcgatctgtttggtcatgaacggggggcctttaccggt
gccaacacccagcgcattggccgttttgaactggcagataaaagctcgctgttcctggat
gaagtgggggatatgccgctggagttgcagcctaaactgctgcgcgtgttacaggaaaag
gagtttgaacgccttggcagcaacaaattacaaactgtcgatgtgcgcttaattgccgcc
acgaaccgcgacctacggcaaatggtggccgaccgggaatttcgtaatgatctgtattac
cgtctgaatgtgtttcctatccggctacccccgctgcgcgaacgtcccgaagatattccg
ctgttagtgaaagcgctgacctttaaaatcgcccaccgtctgaatcggaagatcgacagc
attcccgctgaaacgctgagcatgctgcggcgcatggagtggccgggcaacgtgcgtgag
ctggagaatgtgattgagagggcggtgctgatgacgcgtggcaacgtgctgcatctttcc
ttgccggaaatggcggacgcgtcgcctgtcaggaaagttgcagcaccggttacggaaccg
cgcgccggcgaggacgagtaccagctgattatgcgggtactgcgtgagaccaacggtgtg
gtggccgggccgcgcggtgcggctcagcgtcttggtatcaagcgcaccaccttgctctcg
cgcatgaagcgtctggggattaataaggtggagtcgtaa
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