Pantoea sp. At-9b: Pat9b_5828
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Entry
Pat9b_5828 CDS
T01386
Name
(GenBank) ABC transporter related protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
pao
Pantoea sp. At-9b
Pathway
pao02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pat9b_5828
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pao02000
]
Pat9b_5828
Transporters [BR:
pao02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Pat9b_5828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
oligo_HPY
AAA_21
ABC_ATPase
AAA_29
AAA_22
RsgA_GTPase
nSTAND1
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ADU71984
UniProt:
E6WJF7
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All DBs
Position
pPAT9B01:complement(714825..716456)
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AA seq
543 aa
AA seq
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MSLLSVNQLSVGFDAQPPRVQQVSFAVEPGETLAIVGESGSGKSLSLLALLGLLPGNARV
TGERWFNGRELSGLTADEYRQLRGAQMGYISQDPLSNLHPLKSVGKQIEEAIQAHQRLPR
KALRHRVIALLEEVGIREAAQRYHARPAQFSGGMRQRVMIAMAIALNPKLIIADEPTTAL
DVTVQAAILQLLKRLQQQHGCALLFISHDLRVVADIADRVVVMQHGRIVEQGEKAKLFHQ
PQHPYTRSLLQASWHQYAPAAKPPVVGTHLLSANNLVRQFGRRVGFFSQTQRVLNGISFN
LDKGEILGLVGESGSGKTSLGRLVVGLDGPDQGSIRLNDQLWQQAGQRLAIDHPLRYAVQ
MVFQDPYNSLNPRRRVVEILSEPLQLTQRRESGQPLSAQQLQGAVVDLLQTVELPAELAQ
RYPAQLSGGQRQRVAIARALAMKPQLIVADEAVSALDVTTQHRIMQLMMRLRREQALSLL
FISHDLSAVAALCDRVLVLQNGEIIEQGSSEQIFNRPQQAWTRQLLAAIPGQSRLSPLAT
AEV
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtcattactgagcgtgaatcaactgtcggttggctttgatgcccaaccaccgcgggtg
caacaggtcagcttcgctgtggaacctggggaaacgctggcgatcgttggcgaatccggc
tcgggcaaaagcctgagtctgctggcgctgctcggcctgttacctggcaacgccagggtg
acgggtgagcgatggtttaatggccgtgagttgagtggactgacggccgatgaatatcgc
cagctacggggggcgcagatgggatatatctcccaggacccgctcagtaacctgcatccg
ttaaaaagcgtcggtaagcagatcgaggaggcgattcaggcgcatcaacgcctgccacgc
aaggccctgcgtcacagggtgatcgctttgctggaagaggtgggcatccgtgaggcggcg
caacgttaccatgcgcgtccggcacagttttccggcgggatgcgccagcgcgtgatgatc
gcgatggccatcgcgcttaacccgaaactgattatcgcggatgagcccaccaccgcgctg
gatgtcacggtacaggcggctatcctgcaactgctaaaacgactgcaacaacagcatggc
tgcgcgttgttgtttatcagccatgacctacgggtggtggctgatatcgccgatcgtgtg
gtggtgatgcaacacgggcggattgtggaacagggcgaaaaagcaaagctgttccatcag
ccgcaacatccttatacccgttcgctgttgcaggcgagctggcatcagtatgcccccgcc
gcaaagccaccggttgttggcacgcacctgttgtcggccaacaatctggtacgccagttt
ggccgccgcgtgggcttttttagccaaacgcagcgggtgctgaatggcatcagttttaac
ctggataaaggcgaaattctcgggctggtaggggagtcaggatcggggaaaacctcgctg
ggcaggctggttgttggcctcgatgggccggatcagggcagtatccgactgaatgatcag
ttatggcagcaagccgggcaacggctggccatcgatcatcccttacgttatgcggtgcaa
atggtgtttcaggacccgtataacagcctcaatccgcgtcggcgcgtggtggaaatcctc
agtgaaccgttgcaactgacgcagcgtcgtgaaagcggtcagccattgagcgcacagcag
cttcaaggagccgtggttgacctgctgcaaaccgttgaactcccggctgaactggcgcag
cgctatcccgctcagttatctggcgggcaacgccagcgtgttgccatcgcccgtgcgctg
gcaatgaaaccgcagctgattgtggctgatgaagcggtgtcggcgctggatgtcaccacc
caacatcgcatcatgcagttgatgatgcgtttgcgtcgtgaacaagcgttgtcgctgctg
tttatctctcatgatctctctgccgtcgccgcgctctgcgatcgggtgctggtgttgcag
aatggcgaaatcattgagcagggcagcagtgaacaaatttttaatcgcccacagcaggcg
tggacgcgacaattgttggcggcgatccccggccagtcccgcctgtcaccgttagcgact
gcggaggtctga
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