Pseudomonas paraeruginosa PA7: PSPA7_0528
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Entry
PSPA7_0528 CDS
T00569
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pap
Pseudomonas paraeruginosa PA7
Pathway
pap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSPA7_0528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pap03019
]
PSPA7_0528
Enzymes [BR:
pap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PSPA7_0528
Messenger RNA biogenesis [BR:
pap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PSPA7_0528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
AAA_25
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ABR85367
UniProt:
A6UYN8
LinkDB
All DBs
Position
complement(544256..546163)
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AA seq
635 aa
AA seq
DB search
MSFSSLGLSEALARAVEAAGYSQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPVL
ERLFPAGHPDREHRHGPRQARVLVLTPTRELAAQVHDSFKVYARDLPLNSTCIFGGVGMN
PQIQALAKGVDVLVACPGRLLDLAGQNKVDLSHVEILVLDEADRMLDMGFIHDVKKVLAK
LPPKRQNLLFSATFSKDIVDLANKLLHNPERIEVTPPNTTVERIEQRVFRLPAPQKRALL
AHLVTVGAWEQVLVFTRTKHGANRLAEYLTKHGLPAAAIHGNKSQNARTKALADFKANDV
RILVATDIAARGLDIDQLPHVVNYELPNVEEDYVHRIGRTGRAGRSGEAISLVAPDEEKL
LKAIEKMTRQRIPDGDPQGFDPEAVLPEVAQPEPREAPQKQPRRDKERRSRERKPKEAQA
PAENAAVAGQDGAEKPAGKRRRRGGKNKENREAGQAQQPRQSREARPAKPNRPPEIDGNR
DPEEFLDDDFDNFGNRADYVSPYQGQENKGRGRRGGQQKSQGGAGQQGRGQGQGRGKSQG
SAQGGARGQGAGQGKAKKPRAGKPRGQGRDNPSRMSDAPLREPSEYGVGKQPSRQPVVIN
KRDLVRMDRFPTAEQLDELEPRRKGERPALLTRNR
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttcttccctcggactctccgaggcgcttgcccgcgctgtggaggctgcgggc
tacagccagcccactcccgtgcaacagcgggcgattcccgccgtgttgcaaggtcgcgac
ctgatggtcgcggcacagaccggcaccggcaagaccggtggtttcgccctgccggtactg
gagcgcctgttccccgccggtcatcccgaccgcgaacaccgccacggcccgcgccaggcg
cgggtgctggtactgaccccgacccgcgagctggccgcccaggtgcatgacagcttcaag
gtctacgcccgcgacctgccgctgaacagcacctgcatcttcggcggggttggcatgaac
ccgcagatccaggccctggccaagggcgtcgacgtgctcgtcgcctgccccggccgcctg
ctcgacctggccgggcagaacaaggtcgacctgtcccacgtggaaatcctcgtcctcgac
gaagccgaccgcatgctcgacatgggcttcatccacgatgtgaagaaggtcctcgccaag
ctgccgcccaagcgccagaacctgctgttctcggcgaccttctcgaaggacatcgtcgac
ctcgccaacaagctcctgcacaacccggagcgcatcgaggtgacgccgccgaacaccacg
gtcgagcgcatcgagcagcgcgtgttccgcctgccggcgccgcagaagcgcgccctgctg
gcgcacctggtgaccgtcggcgcctgggaacaggtgctggtcttcacccgtaccaagcac
ggcgccaaccgcctcgccgagtacctgaccaagcacggcctgccggccgccgcgatccac
ggcaacaagagccagaatgcgcggaccaaggcgctggccgacttcaaggccaacgacgtg
cggatcctggtggcgaccgatatcgccgcccgcggcctggacatcgaccagttgccccat
gtggtcaactacgaactgcccaacgtcgaggaagactacgtccaccgtatcggccgtacc
ggccgcgccggccgcagcggcgaggcgatctcgctggtggcgccggacgaggagaaactg
ctcaaggccatcgagaagatgaccaggcagcgcattcccgacggtgatccccagggcttc
gacccggaagccgtgctgcccgaggtggcccagccggaaccccgcgaggcgccgcagaag
cagccgcgccgcgacaaggaacggcgcagtcgtgagcgcaagccgaaagaggcccaggcg
cccgcggaaaacgctgccgtcgccggccaggacggcgccgagaagcctgccggcaagcgc
cgccgccgtggcggcaagaacaaggaaaaccgcgaggccggccaggcgcagcaaccgcgg
cagagccgtgaagcgcgtcccgccaagcccaatcggccgccggaaatcgacggtaatcgc
gatccggaagagttcctcgacgacgacttcgacaatttcggcaaccgcgccgactacgtc
agcccttaccagggccaggaaaacaaaggtcgcggccgccgcggcggccagcagaagtcg
cagggcggcgctggccagcagggtcgtggccagggccaggggcgcggcaagagccagggc
agcgctcaaggcggcgctcgcggccagggtgccggccagggcaaggcgaagaaaccgcgc
gccggcaagccgcgcggccagggccgtgacaatccttcgcggatgagcgacgcgccgctg
cgcgagccgtccgagtatggcgtcggcaagcagccgagccgtcagccggtggtgatcaac
aagcgcgacctggtgcgcatggatcgcttccccaccgccgagcagctcgacgagctggaa
ccacggcgcaagggtgagcgccccgcgctgctgacccgcaaccgctga
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