Pseudomonas paraeruginosa PA7: PSPA7_0921
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Entry
PSPA7_0921 CDS
T00569
Symbol
xth2
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pap
Pseudomonas paraeruginosa PA7
Pathway
pap03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSPA7_0921 (xth2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pap03400
]
PSPA7_0921 (xth2)
Enzymes [BR:
pap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PSPA7_0921 (xth2)
DNA repair and recombination proteins [BR:
pap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PSPA7_0921 (xth2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF7939
Motif
Other DBs
NCBI-ProteinID:
ABR85102
UniProt:
A6UZS2
LinkDB
All DBs
Position
complement(922676..923461)
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AA seq
261 aa
AA seq
DB search
MGTLKIATFNVNGIQTRLAALLAWLEREAPDIVCLQELKTPDARFPAAALEKAGYGAIWQ
GQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRYLEAAVDGLLVASLYLPNGNPQPGPK
FDYKLAWFEHLIRHAAELMKSGHPVVLAGDFNVVPSNFDIYDTRSWKKDALLQPESRECF
ERLLRQGWVDALRQRFPDRRLYTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDAGVDR
WVRGEEHASDHAPAWVSLRRP
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtgggcaccctgaagatcgccaccttcaacgtcaacggcatccagacccggctggccgcg
ctgctggcctggctggagcgggaagcgccggacatcgtctgcctgcaggaactgaaaacg
cccgacgcgcgcttccccgccgcggcgctggagaaggccggatacggcgcgatctggcag
ggccagtcggcgtggaacggcgtcgccatcctcgcccgcgacagccagccgctggaggta
cgccgcggcctgccgggcaacgccagcgatccccacagccgctacctcgaagcggccgtc
gacggcctgctggtggccagcctgtacctgcccaatggcaatccccagccgggaccgaag
ttcgactacaagctggcctggttcgagcacctcatccgacacgccgccgagctgatgaag
agcggccacccggtggtgctggccggcgacttcaacgtggtgcccagcaacttcgatatc
tacgacacccgctcctggaaaaaggacgccctgctccagccggagtcccgcgagtgcttc
gagcgcctcctgcggcagggctgggtggacgcgctgcgccagcgtttccccgaccggcgc
ctctataccttctgggactacttccgccagcactggcaacgcgacgccgggctgcgcatc
gaccacctgctgctcagcgccagcctggcggaccacctggaagacgccggggtggatcgc
tgggtgcgcggcgaggagcacgccagcgaccacgcgccggcctgggtaagcctgcgccga
ccctga
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