Pseudomonas paraeruginosa PA7: PSPA7_1158
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Entry
PSPA7_1158 CDS
T00569
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pap
Pseudomonas paraeruginosa PA7
Pathway
pap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSPA7_1158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pap03019
]
PSPA7_1158
Enzymes [BR:
pap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PSPA7_1158
Messenger RNA biogenesis [BR:
pap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PSPA7_1158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABR83748
UniProt:
A6V0F9
LinkDB
All DBs
Position
1153680..1155023
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AA seq
447 aa
AA seq
DB search
MTFASLGLLDPLLKALEGLGLHTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAAFALPLL
QRLTLEGPQVAANSVRALVLVPTRELAEQVHGSIRDYGQHLPLRTAVAYGGVSINPQMMK
LRKGVDVLVATPGRLLDLYRQNAVQFARLQALVLDEADRMLDLGFARELDELFAALPRKR
QTLLFSATFSDAIRTLAGELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELFCHLLQ
ANRWRQALVFAKTRKSVEELVGLLQRQGIAADSIHGDKPQPARLRALQRFKAGEVDLLVA
TDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGRTGRAGATGQALSLVCADEVELLAAIE
TLIGQTLQRREEPDFEPEHRVPQTAPGGVVLKKPKKPKKTKAAEATGKPGQIHLGTWFDS
SAPKVRAVRKAPGFGAAGKPKKRPSGK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcgcctccctcggtctgctcgaccccctgctcaaggccctcgaagggctcggc
ctgcacacgcccacgccgatccaggcccaggccattccgccggcgctcaagggccgcgac
ctgctcgcagcggcccagaccggcaccggcaagaccgccgctttcgccctgccgctgctg
cagcggctgaccctggaggggccgcaggtcgcagccaactcggtgcgcgcactggtactg
gttccgacccgcgaactggccgagcaggtccacggcagtattcgcgactacggccagcac
ctgccgctgcgtaccgcggtggcctatggcggggtcagcatcaatccgcagatgatgaag
ctgcgcaagggcgtggacgtcctcgtcgccaccccgggccgcctgctcgacctgtaccgg
cagaacgcggtgcagttcgcccggctccaggcgctggtgctggacgaggccgatcgcatg
ctcgacctcggtttcgcccgcgagctggacgagctgttcgccgcgctgccgcgcaagcgc
cagaccctgctgttctccgcgaccttctccgacgccatccgcacgttggccggcgaactg
ctgcgcgacccgctgtccatcgaggtcagtccgcgcaataccgcggcgaagagcgtcagg
caatggctggtgccggtggacaagaagcgcaaggccgagctcttctgtcacctgttgcag
gccaatcgctggcgccaggcgctggtcttcgccaagacccggaagagtgtcgaggaactg
gtcggattgctgcagcggcagggtatcgccgccgactcgatccatggcgacaagccgcag
ccggcgcgattgcgcgcgctacagcgattcaaggccggcgaggtcgacctgctggtggcc
accgacgtcgccgcgcgaggcctggacatcgaggaaatgccgctggtggtcaacttcgac
ctgccgatcgtcgccgaggactacgtgcaccggatcggccgcaccggccgcgccggcgct
accggccaggcgctgtcgctggtctgcgccgacgaggtggaactgctggcggcgatcgag
acgctgatcggccagaccctgcagcgccgcgaagagcccgacttcgagccggagcaccgg
gtgccgcagaccgcgccgggtggggtggtgctgaagaaaccgaagaagccgaagaaaacc
aaggccgccgaggccaccggcaagcccggccagatccacctgggcacctggttcgacagc
agcgcgccgaaggtcagggcggtacgcaaggcgccgggcttcggcgcggcgggcaagccg
aagaagcggccgtccgggaagtag
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