Pseudomonas paraeruginosa PA7: PSPA7_2185
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Entry
PSPA7_2185 CDS
T00569
Name
(GenBank) ribonuclease E (RNase E)
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
pap
Pseudomonas paraeruginosa PA7
Pathway
pap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSPA7_2185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pap03019
]
PSPA7_2185
03009 Ribosome biogenesis [BR:
pap03009
]
PSPA7_2185
Enzymes [BR:
pap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
PSPA7_2185
Messenger RNA biogenesis [BR:
pap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PSPA7_2185
Ribosome biogenesis [BR:
pap03009
]
Prokaryotic type
rRNA processing factors
PSPA7_2185
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ABR85242
UniProt:
A6V3C2
LinkDB
All DBs
Position
complement(2239122..2242343)
Genome browser
AA seq
1073 aa
AA seq
DB search
MPIAVSGSPGNHWYYMKRMLINATQPEELRVALVDGQRLFDLDIESGAREQKKANIYKGR
ITRVEPSLEAAFVDFGAERHGFLPLKEISREYFKKSPEGRINIKEVLSEGQEVIVQVEKE
ERGNKGAALTTFISLAGRYLVLMPNNPRAGGISRRIEGEERNELREALNGLNAPADMGLI
VRTAGLGRSTEELQWDLDYLLQLWSAIKEASGERGAPFLIYQESNVIIRAIRDYLRQDIG
EVLIDSIDAQEEALNFIRQVMPQYASKVKLYQDSVPLFNRFQIESQIETAFQREVKLPSG
GSIVIDPTEALVSIDINSARATKGGDIEETALQTNLEAAEEIARQLRLRDIGGLIVIDFI
DMTPAKNQRAVEERVREALEADRARVQVGRISRFGLLEMSRQRLRPSLGETSGIVCPRCN
GQGIIRDVESLSLAILRLIEEEALKDRTAEVRARVPFQVAAFLLNEKRNAITKIELRTRA
RIFILPDDHLETPHFEVQRLRDDSPELVAGQTSYEMATVEHEDAQPVSSTRTLVRQEAAV
KTVAPQQPAPQAQEPVEAPKPMPEPSLFQGLVKSLVGLFAGKEQPAAKPAESAKPAAERQ
SRQDERRNGRQQNRRRDGRDGNRRDEERKPREERAERQPREERADRPNREERNERRREER
AERPNREERQPREAREERTERPAREERQPREGREERSERRREERAERPAREERQPREGRE
ERAERPVREERQPREERQARDAAALEAEALPNEEALEQDDQDDTDGERPRRRSRGQRRRS
NRRERQREVSGEQEGSEAAENGAAPLNTVAAAAAAGIAVASEAQESSAEQAPLASEIAPE
SASETAPTGEASESSESAEASASEAAATDTPVVVSLIENEADQSTLLVAQSAEEALSISE
SVEARSVIESVPAADTTEETAAPAAPATVEAAPSEPAVTEEPTPAPAATPANATGRALND
PREKRRLQREAERLAREAAAAAEAATQAIPAAIEESPVAASEAPTVQEEPTVAQVKEEAV
QAEAPAQEQAQEAVQASPEASNETETETETETETAEEEHAKKPEESETSRPHA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
gtgccgatcgccgtttccggtagccccggaaaccattggtactacatgaaaagaatgctg
atcaacgcgactcaacccgaagagttgcgtgttgcactggtcgacggccaacgcctgttc
gacctcgacatcgagtcgggcgcccgcgagcagaagaaggccaacatctacaagggccgt
atcactcgcgtcgaacccagcctcgaagccgccttcgtcgacttcggcgccgaacgccac
ggcttcctccccctcaaagaaatctcccgcgaatacttcaagaaatcccccgaaggccgg
atcaacatcaaggaagtcctgagcgaaggccaggaagtcatcgttcaggtcgagaaggaa
gagcgcggcaacaagggcgccgccctgaccaccttcatcagcctggccggccgctacctg
gtgctgatgccgaacaacccgcgcgccggcggcatctcccgccgcatcgaaggcgaagag
cgcaacgaactgcgcgaagcgctgaacggcctcaacgccccggccgacatgggcctgatc
gtgcgcaccgccggcctggggcgcagcaccgaggaactgcagtgggacctcgactacctg
ctgcaactctggagcgccatcaaggaagcctccggcgagcgtggcgcgcccttcctgatc
taccaggaaagcaacgtcatcatccgcgcgatccgcgactacctacgccaggatatcggc
gaagtgctgatcgacagcatcgacgcccaggaagaagccctgaacttcatccgccaggtg
atgccgcagtacgccagcaaggtcaagctgtaccaggacagcgtcccgctgttcaaccgc
ttccagatcgagagccagatcgagaccgccttccagcgcgaagtgaagctgccgtccggc
ggctccatcgtcatcgacccgaccgaagccctggtatccatcgacatcaactcggcacgc
gcgaccaagggcggcgacatcgaggaaaccgcgctgcagaccaacctggaagcggccgag
gaaatcgcccgccagctgcgcctgcgcgacatcggcggactgatcgtgatcgacttcatc
gacatgaccccggcgaagaaccagcgcgccgtggaagaacgcgtccgcgaagccctcgag
gccgaccgcgcgcgcgtccaggtcggtcgcatctcgcgcttcggcctgctggaaatgtcc
cgccagcgcctgcgtccatccctcggcgagaccagcggcatcgtctgcccgcgctgcaac
gggcagggcatcatccgcgacgtcgagtcgctgtcgctggccatcctgcgcctgatcgag
gaagaagccctgaaggaccgcaccgcggaagtccgcgcccgcgttccgttccaggtggcc
gctttcctgctcaacgagaagcgcaacgccatcaccaagatcgaactgcgcacccgcgcg
cgcatcttcattctgccggacgaccacctggaaaccccgcacttcgaagttcagcgcctg
cgcgacgatagcccggaactggtcgccggccagaccagctacgagatggccaccgtcgag
cacgaagatgcccagccggtcagctcgacccgcaccctggtccgccaggaggccgcggtc
aagaccgtcgcgccgcagcaacccgccccgcaggcccaggagccggtcgaggcgcccaag
cccatgcccgagccgagcctgttccaaggcctggtgaagtcgctggtcggcctgttcgca
ggcaaggagcaaccggccgccaagcctgccgagagcgccaagccggccgccgagcgccag
tcgcgccaggacgagcgccgcaacggccgccagcagaaccgtcgccgcgacggccgcgat
ggcaatcgtcgcgacgaagagcgcaagccgcgcgaagagcgcgccgagcgccagccgcgt
gaagaacgcgccgaccgcccgaaccgcgaagagcgcaacgagcgtcgccgcgaggagcgc
gccgagcgtccgaaccgcgaggagcgccagccgcgcgaagcgcgtgaggaacgcaccgag
cgtccggcccgcgaagagcgtcagccgcgcgaaggtcgcgaagagcgtagcgagcgtcgc
cgcgaggaacgtgccgagcgaccggctcgcgaggagcgccagccacgcgaaggtcgtgag
gagcgcgccgaacgcccggtccgcgaggagcgccagccgcgcgaggaacgccaggcccgt
gacgccgcggcgctggaagccgaagcgctgcccaacgaggaagccctggagcaggatgac
caggacgataccgatggcgaacgtccgcgccgccgctcccgcggccagcgccgtcgcagc
aatcgccgcgaacgccagcgcgaagtcagtggcgagcaggaaggcagcgaagccgctgag
aatggcgccgctccgctgaacaccgtggcagccgccgcggccgccggcatcgctgtcgcc
agcgaagcacaggaatccagcgcggagcaggctccgctcgccagcgaaatcgcgcccgaa
tccgcctccgagactgcgccgaccggcgaagccagcgagagcagcgaaagcgccgaggca
agcgccagtgaagccgccgcgaccgataccccggtcgtcgtcagcctgatcgagaacgaa
gccgaccagagcaccctgctggtggcgcaaagcgccgaggaagccctctccatcagcgaa
agcgtcgaggctcgcagcgtcatcgagagcgttccggcagcggacactaccgaagaaacc
gctgccccggcagctccggcgaccgtcgaagcggcaccgagcgaaccggcggtcaccgag
gagccaaccccggccccagcggcgactccggccaatgccaccggccgcgccctcaacgat
ccgcgcgagaagcgtcgcctgcagcgcgaagccgaacgcctggcacgcgaagccgccgcc
gcggccgaggcagcaacccaggccatccctgccgccatcgaggaaagccctgtcgcagcc
agcgaggcgccgactgtccaggaagagcccacggtcgcccaggtgaaagaggaagccgtc
caggccgaagctccggctcaggagcaggcccaggaggccgtgcaggccagccctgaagcc
tctaacgagaccgagaccgagaccgagaccgagaccgagaccgccgaagaagagcacgcg
aaaaagcccgaggaaagcgaaacctctcggccgcacgcctga
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