Pseudomonas aeruginosa PA7: PSPA7_4850
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Entry
PSPA7_4850 CDS
T00569
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pap
Pseudomonas aeruginosa PA7
Pathway
pap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSPA7_4850 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pap03400
]
PSPA7_4850 (recD)
Enzymes [BR:
pap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PSPA7_4850 (recD)
DNA repair and recombination proteins [BR:
pap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSPA7_4850 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
RecD_N
Helicase_RecD
Viral_helicase1
SH3_13
AAA_22
UvrD-helicase
AAA_17
SLFN-g3_helicase
Mg_chelatase
AAA_28
T2SSE
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ABR83672
UniProt:
A6VAV1
LinkDB
All DBs
Position
complement(4993630..4995792)
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AA seq
720 aa
AA seq
DB search
MNPTLKQLAGEVRDTGDQRLTQPLAARHDLLRQLDLWVARGWLRALDRALVAFLVELEPQ
ADPRVLLAAALTSHQLGHGHVCLDLDATLGAPDAALSLPPEGDESGDVLLPSQLLQGMRL
DAWRQALAGSPLVEVVDGRADDPAASDQEASPLVLCDQRLYLRRYWRHELEIAAALRERL
ARRAPLAEDLAPRLAALFAQPPREDGRRVTDWQKLACALAARGYFSLITGGPGTGKTTTV
VRLLGLLQAPAVAAGQPLRIRLAAPTGKAAARLSESIGQQVRALPLPEAVLQAIPAEVTT
LHRLLGSRPDTRHFRHHRDNPLALDVLVVDEASMIDLEMMASLLDALPPQARLILLGDKD
QLASVEAGAVLGDLCRDAEEGWYSAETRAWLQQVSGETWQGLREGSAQAHPLAQQTVMLR
HSRRFGASSGIGRLARLVNRQQAADARALLDQPPADLFDLRLRGERDVAFARLFVDGHPR
AAGTPYGYRHYLQRLAEGRPPAGLALESEAWERWAQSVLAAFDAFRLLCALRRGPWGVEG
LNQRVAAELLRLGLIDADHGWYEGRPVLVTRNDYSLGLMNGDIGIALRLPERGADGSLRF
ALRVAFPRNDGSGGVRFVLPSRLVEVDTVFAMTVHKSQGSEFAHTALVLPDALNPVLTKE
LVYTGITRARDWFSLVESHPGVFEEALRRKVRRLSGLMLHLQAESREAPRQPGEQGELPF
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgaccctcaagcaactggccggcgaagttcgcgatactggcgaccagcggctg
acgcaaccgctggcggcgcgccacgatctgctgcgccagctcgacctgtgggtggcgcgc
ggctggttgcgcgcgctggaccgcgcgctcgtggccttcctcgtcgaactggagccgcag
gccgatccccgggtgctgctggcggcggccctgactagccaccaactgggccatggtcac
gtctgcctggacctggacgcgaccctcggcgcccccgacgcggccctgtcgctgccgccg
gaaggcgatgaaagtggtgatgtcctgctgccttcgcagctgctgcagggtatgcgcctc
gacgcctggcgccaggccctggcaggttcgccgctggtggaggtggtcgacgggcgtgcg
gacgatcccgcagcgagcgaccaggaggcctcgccgctggtgctctgcgaccagcgtctc
tacctgcgccgctactggcggcatgaactggaaatcgccgcggccctgcgcgagcgtctg
gcgcgccgggcgcccctggccgaggacctggcgccacgcctggccgcgctgttcgcgcag
ccgccgcgggaagacggccggcgcgtcaccgactggcagaagctggcctgcgccctggcg
gcgcgcggttacttcagtctgatcaccggcggccctggcaccggcaagaccactaccgtg
gtacgcctgctcggcctgctccaggcgccggcggtggccgccggccagccgctgcgcatc
cgcctcgcggcacccaccggcaaggccgcggcgcgcctgtccgaatccatcggccagcag
gtccgcgccctgccattgccggaggcggtgctgcaggcgatccccgccgaggtcaccacc
ctgcaccggctgctcggcagccggccggatacccggcacttccgccatcaccgggacaac
ccgctggcgctggatgtgctggtggtggacgaggcctcgatgatcgacctggagatgatg
gccagcctgctcgacgcgctgccgccgcaggcgcgcctgatcctccttggcgacaaggac
cagttggcctcggtggaggccggcgcggtgctcggcgatctctgccgggacgccgaggaa
ggctggtatagcgccgagacccgcgcctggttgcagcaggtcagcggcgaaacctggcag
gggctgcgcgaaggttcggcgcaggcgcatccgctggcgcagcaaacggtgatgctgcgg
cattcgcggcgtttcggcgccagcagcgggatcggccgcctggcgcggctggtcaatcgg
caacaggccgcggatgcccgcgcgctgctcgaccagccgcccgccgacctgttcgatctg
cgcctgcgcggcgagcgggacgtggctttcgcccggttgttcgtcgacgggcatccgcgc
gcggctggaaccccatacggctatcggcactacctgcaacgcctggccgagggccgtccg
cctgccgggttggcgctggagagcgaggcctgggagcgctgggcgcagtcggtgctggcg
gcgttcgatgccttccgcctgctctgcgcgctgcgccgcggtccctggggcgtggagggg
ttgaaccagcgggtggcggcggaactgctgcgactcggcctgatcgacgccgaccacggc
tggtacgagggacgaccggtgctggtgacgcgcaacgactacagcctggggctgatgaac
ggcgacatcggcatcgccctgcgcctgcccgagcgcggcgccgacggtagcctgcgcttc
gccttgcgggtcgccttcccgcgcaacgatggcagcggcggggtgcgtttcgtcctgccg
agccgcctggtcgaggtggacaccgtgttcgccatgaccgtgcacaagtcgcagggctcg
gagttcgcgcataccgcgctggttctgccggacgcgctgaacccggtgttgaccaaggaa
ttggtgtataccggcatcacccgcgcccgcgactggttcagcctggtggaaagccacccc
ggggtattcgaggaagcgctgcggcgcaaggtgcgccgactcagcgggctgatgctgcat
ctgcaggcggaaagccgggaagcgccgcgccagcctggagaacagggcgagctaccgttc
tga
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