Pseudomonas paraeruginosa PA7: PSPA7_4852
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Entry
PSPA7_4852 CDS
T00569
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pap
Pseudomonas paraeruginosa PA7
Pathway
pap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSPA7_4852 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pap03400
]
PSPA7_4852 (recC)
Enzymes [BR:
pap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PSPA7_4852 (recC)
DNA repair and recombination proteins [BR:
pap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSPA7_4852 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ABR81292
UniProt:
A6VAV3
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All DBs
Position
complement(4999520..5003032)
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AA seq
1170 aa
AA seq
DB search
MPEPLGTTALTPGFMIVHGNRLDDLRDLAVSWMRRYPLAPLESERILVHSNGIAQWLKLA
LAEDPRADGGGGGIAAALEVQLPAQFLWQAYRAVLGRESIPEVSELDKAPLTWRLMRLLP
GLLERPEFHALQRFLADDADLRKRHQLAERLADLFDQYQVYRGDWLDDWSQGRDQLRTAN
GKARPLDASERWQAELWRALLADVGADSLARSRSGVHRRFIEALRSAEVAPRALPRRVVV
FGISSMPAQTLEALAALARFSQVLLCVHNPCRHHWADIVADKDLLRHEYRRQQRRAGTPA
GLDEDLQHQHAQPLLAAWGKQGRDYINLLDSYDDPDSYRTLFGEVNGGRIDLFSEEPPAS
LLGQLQDDILELRPLAETRRHWPPVSPQHDASIRFQVAHSAQREVEILHDQLLARFNADP
RLKPRDVIVMVPDINAYAPHIEAVFGQVPRDDQRFIPYTLADQGQRGREPLLIALEHLLK
LPESRFAVSEILDLLDVPALRRRFGVDEAELAILHRWIEGAGVRWGLDAAQRERLGLPPG
LEGNSWRFGLRRMLLGYAVGEGAPLQGIQPYDEVGGLDAALAGPLAVLLERLEVAYAELA
EPATPVQWGERLQALLTVFFEAHDERDELLLTQLLQLLERWQEHCACAAFAEPLPLSVVR
EAWLGSLDQGGLNQRFLAGAVSFCTLMPMRAIPFRLVCLLGMNDGDYPRQQAPLDFDLMR
NDYRPGDRSRREDDRYLLLEALLSAREQLYVSWVGRSIRDNEERPPSVLIGQLRDHLAAG
WRLSPDADGDALLRALTQEHPLQPFSRRYFQAAPAQGVDGLFTYAREWREVHREDEAAAA
EAEAPLPPLVLEGALGLRPLAEFLANPVNAFFQQRLKVRFDDEQLTGNDEEPFELDALDN
WKLQFELTERLKRWVELDWDAERLPAQLQAQVERLRRQGRLPLAAFGEFSARHLLQPLPD
LLWRYRQEIQRWPEVVEQQQELRHRHPSGLELEDWLGGLRRDASGRLARLQLLSGKLHEG
RGYKWHSLVRHWLQHLALQMLGQPVRSVLVSQSGTLEIPPLPAERAGEHLDRLLDAWCEG
MRRPLPVACRTAFAWLAGGGAGEPEKAAREARKRYEGGFNVGGEVDGSPALARVYPDFDR
LLADGGFAHWAELLYAPLLTTLGRGTEEPA
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacccttgggaaccacagccctcacgcccggattcatgatcgtccatggcaac
cgcctggacgacctgcgcgacctcgcggtctcctggatgcgccgctatccgctggcgccg
ctggagagcgagcggatcctggtgcacagcaacggtatcgcccagtggctgaagctggcg
ctggccgaggatccgcgcgcggacggcggcggcggtggcatcgccgcggcgctggaggtg
cagctgccggcgcagttcctctggcaggcctaccgcgcggtgctcggtcgcgagagcatt
cccgaggtttccgagctggacaaggcgccgctgacctggcgtctgatgcgcctgctcccg
gggctgctggagcgtcccgagttccatgccctgcaacgcttcctcgccgatgacgccgac
ctgcgcaagcgccaccaactggccgagcgcctggccgacctgtttgaccagtaccaggtc
taccgcggcgactggctcgacgactggagccaggggcgcgaccagttgcgcacggcgaac
ggcaaggcgcgtccgctcgacgccagcgaacgctggcaggccgaactgtggcgcgcgctg
ctcgccgacgtcggcgccgacagcctggcccgcagccgttccggcgtgcaccgacgtttc
atcgaggccttgcgttcggccgaggtcgcaccgcgcgcattgccgcggcgggtagtggtg
ttcggcatctcctcgatgccggcgcagaccctcgaggcgctggccgccctggccaggttc
agccaggtgctgctctgcgtgcacaacccctgccgccaccactgggccgacatcgtcgcc
gacaaggacctgctgcgccacgagtaccgccgccagcagcgccgcgccggcaccccggcc
ggcctcgacgaggacctccagcaccagcacgcccagccgctgctggcggcctggggcaag
cagggccgcgactacatcaacctgctcgacagctacgacgacccggacagctatcgcacg
ctgttcggcgaggtcaacggcgggcgcatcgacctgttcagcgaggagccgccggccagt
ctgctcggccagttgcaggacgacatcctcgaactgcgcccgctggcggagacccgtcgg
cactggccgccggtgagcccgcagcacgatgcctcgatccgcttccaggtagcgcacagc
gcgcagcgcgaggtggagatcctccacgaccaattgctcgcccgcttcaacgccgatccg
cgcttgaagccgcgcgacgtgatcgtcatggtccccgacatcaacgcctacgcgccgcac
atcgaagcggtgttcggccaggtgccgcgcgacgaccagcgcttcattccctacaccctc
gccgaccagggccagcgcggccgcgaaccgctgctgatcgccctggagcacctgctgaaa
ctgcccgagagccgcttcgcggtaagtgaaatcctcgacctcctggacgtcccggcactg
cgccggcgtttcggcgtcgacgaggccgagctagcgatcctgcatcgctggatcgagggt
gcgggggtacgctggggcctggacgccgcgcagcgcgagcgtctcggcctgccgccgggc
ctggagggcaacagctggcgcttcggcctgcggcgcatgctgctcggctatgccgtcggc
gagggcgcgcccctgcaggggatccagccctatgacgaggtcggtggtctcgacgcggcc
ctggccggcccgctggcggtgctgctggagcgcctcgaggtggcctatgccgaactggcc
gagccggccaccccggtacagtggggcgagcgcctgcaggccttgctcacggtattcttc
gaggcccacgacgagcgcgacgaactgctgcttacccagctcctgcaactgctcgagcgc
tggcaggaacactgcgcctgcgcggctttcgccgaaccgctgccgctcagcgtggtacgc
gaggcctggctcggcagtcttgaccagggcggcctgaaccagcgcttcctggctggcgcg
gtgagcttctgcacgctgatgccgatgcgcgcgatcccgttccggctggtctgcctgctg
ggcatgaacgacggcgactacccgcgccagcaagcgccgctggacttcgacctgatgcgc
aacgactaccgtcccggcgaccgctcgcggcgcgaggacgatcgctacctgctgctcgag
gcgctgctctcggcgcgcgagcagctctacgtgagctgggtggggcgaagcatccgcgac
aatgaagagcggccgccctcggtgctgatcggccagttgcgcgatcacctggcggccggc
tggcgcctgtctccggacgctgacggcgatgcgctgctgcgcgccctgacccaggaacat
ccgctgcagccgttcagccggcgctatttccaggctgcgccggcgcagggcgtggacggt
ctgtttacctatgcccgcgagtggcgcgaagtccatcgcgaggacgaagccgccgctgcc
gaggccgaggcgccgctgcccccgctggtcctggagggcgcgctgggtttgcgcccgctg
gcggagttcctggccaacccggtgaacgccttcttccagcagcggctcaaggtgcgtttc
gacgacgagcaactgaccggcaacgacgaagaacccttcgaactggatgccctggacaac
tggaagctgcagttcgagctgaccgagcgcctgaagcgctgggtggagctggattgggac
gccgagcgcctgccggcgcagttgcaggcgcaggtcgagcgcctgcgccggcaggggcgc
ctgccgctggcggcgttcggcgagttctccgcgcgccatttgctgcaaccgctgcccgac
ctgctctggcgctatcgccaggaaatccagcgctggccggaggtggtcgagcagcagcag
gaactgcgccatcgccatccttccgggctggaactggaggactggctcggtggactgcgc
cgcgacgcatccggacgcctggcgcgcctgcagttgctcagcggcaagctccacgaaggg
cgcggctacaagtggcatagcctggtgcgccactggttgcagcaccttgccttgcagatg
ctcggccagccggtgcgcagcgtgctggtgagccagagcggaaccctggagattccgccg
ctgccggccgagcgcgccggtgaacacctcgaccggctgctcgacgcctggtgcgaaggc
atgcgccggcccctgccggtggcctgccggacagccttcgcctggctggccggcggtggc
gccggcgagccggagaaggccgcacgcgaggcgcgcaagcgctacgaaggcggcttcaac
gtcggcggcgaagtggatggctcgccggctctggcgcgggtctacccggacttcgatcgg
cttctcgccgatggtggcttcgcccattgggccgaactgctctacgcaccgttgctgacc
accctgggccgtggcacggaggaaccggcatga
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