Pseudomonas paraeruginosa PA7: PSPA7_5035
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Entry
PSPA7_5035 CDS
T00569
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
pap
Pseudomonas paraeruginosa PA7
Pathway
pap02020
Two-component system
pap02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pap00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSPA7_5035 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PSPA7_5035 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pap03021
]
PSPA7_5035 (rpoN)
Transcription machinery [BR:
pap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSPA7_5035 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
CCDC14
HTH_IclR
HTH_21
Motif
Other DBs
NCBI-ProteinID:
ABR84512
UniProt:
A6VBD6
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All DBs
Position
5187742..5189235
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AA seq
497 aa
AA seq
DB search
MKPSLVLKMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQEDGDDFDGSD
PLADGAEQATSAPQESALQESTTPSVESLDDDQWSERIPSELPVDTAWEDIYQTSASSLP
SSDDDEWDFTARTSNGESLHSHLLWQVNLAPMSDTDRMIAVTIIDSINNDGYLEESLEEI
LAALDPELDVELDEVEVVLRRIQQLEPAGIGARNLRECLLLQLRQLPPATPWLDEALRLV
SDYLDLLGGRDYGQLMRRMKLKEDELRLVIELIQCLHPRPGSQIESSEAEYIVPDVIVRK
DNERWLVELNQEAMPRLRVNATYAGMVRRADSSADNTFMRNQLQEARWFIKSLQSRNETL
MKVATQIVEHQRGFLDYGEEAMKPLVLHDIAEAVGMHESTISRVTTQKYMHTPRGIFELK
YFFSSHVSTAEGGECSSTAIRAIIKKLVAAENAKKPLSDSKIAGLLEAQGIQVARRTVAK
YRESLGIAPSSERKRLV
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccatcgctagtcctcaagatgggccagcagctgacgatgacgcctcagctgcaa
caggccatacgcctcctccagctctccaccctggacctccagcaggaaatccaggaagcg
ctggaatccaatcccatgctcgaacgccaggaagacggcgacgatttcgacggcagcgac
ccgctcgccgatggcgccgaacaggcaaccagcgcgccgcaggagagcgccctccaggaa
agcaccacacccagcgtagaaagcctcgacgacgaccagtggagcgagcgcatccccagc
gaactgccggtggataccgcctgggaggacatctaccagaccagcgccagcagcctgccc
agcagcgacgacgacgaatgggacttcaccgcgcgcaccagcaacggcgagagcctgcac
agccacctgctctggcaggtgaacctggcgccgatgtcggacaccgaccgcatgatcgcg
gtgaccatcatcgacagcatcaacaatgacggctatctggaggagtccctcgaggagatc
ctcgccgccctcgatccggagctggacgtcgagctcgacgaagtcgaagtcgtgctgcgc
cgcatccagcagctggagcccgccggcatcggcgctcgcaacctgcgcgagtgcctgttg
ctgcaactgcgccagctgccacccgccacgccctggctggacgaagccctgcgcctggtt
tccgactacctcgacctgctcggcggccgcgactacggccagttgatgcggcgcatgaag
ctcaaggaagacgagttgcgcctggtcatcgagctgatccagtgcctgcatccacggccc
ggctcgcagatcgagtcgagcgaggccgaatacatcgtcccggacgtcatcgtgcgcaag
gacaacgagcgctggctggtggaactgaaccaggaggcgatgccacgcctgcgtgtcaac
gccacctatgccggcatggtccgccgtgccgacagcagtgccgacaataccttcatgcgc
aaccagttgcaggaagcgcgctggttcatcaagagcctgcagagccgcaacgagacgctg
atgaaggtggcgacgcagatcgtcgaacaccagcgtggcttcctcgactacggcgaggaa
gccatgaagccgctggtcctgcacgacatcgccgaagcggtgggtatgcacgagtcgacc
atttcgcgggtcaccacgcagaaatatatgcatacgccgcgcggtattttcgagctgaaa
tatttcttttcaagtcacgtcagtaccgccgaaggcggggaatgctcgtccaccgcgatc
cgcgcgatcatcaagaaactggtggccgcggaaaatgcgaaaaagccattgagcgacagc
aagatcgctggtttactggaggcacagggcattcaagtggctcgccgcaccgtcgccaag
taccgcgaatccctgggcatagccccttcgagcgagcgcaagcgactggtgtga
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