Pseudomonas paraeruginosa PA7: PSPA7_6021
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Entry
PSPA7_6021 CDS
T00569
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pap
Pseudomonas paraeruginosa PA7
Pathway
pap00300
Lysine biosynthesis
pap00470
D-Amino acid metabolism
pap01100
Metabolic pathways
pap01110
Biosynthesis of secondary metabolites
pap01120
Microbial metabolism in diverse environments
pap01230
Biosynthesis of amino acids
Module
pap_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pap00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PSPA7_6021 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSPA7_6021 (dapF)
Enzymes [BR:
pap01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PSPA7_6021 (dapF)
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Gene cluster
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ABR83953
UniProt:
A6VE52
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Position
6217148..6217978
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHVQPKHVKLWGDRNTGVGFDQLLIVEAPSSPDVDF
RYRIFNADGSEVEQCGNGARCFARFVQDKRLTVKKSIRVETKGGIIELNIRPDGQVTVDM
GPPRLAPAEIPFQAEREALSYEIEVNGQRVELAAVSMGNPHGVLRVENVDSAPVHSLGPQ
LEVHPRFPKKANIGFLQVLDPHHARLRVWERGVGETQACGTGACAAAVAGIRQGWLQSPV
QIDLPGGRLHIEWAGPGQPVMMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgcgcttcaccaagatgcatgggctgggcaatgacttcatggtcctcgacctg
gtcagccagcacgcccatgtgcaacccaagcacgtcaagctctggggcgaccgcaacacc
ggggtcggcttcgaccagttgctgatcgtcgaagccccgagcagccccgacgtcgacttc
cgctaccgcatcttcaatgccgacggctccgaagtggaacagtgcggcaacggcgcgcgc
tgcttcgcccgtttcgtccaggacaagcgcctgacggtgaagaagagcatccgcgtagaa
accaagggcggcatcatcgagctgaatatccgcccggacggccaggtcacggtggacatg
ggtccgccgcgcctggccccggccgagataccgttccaggccgagcgcgaagccttgtcc
tatgagatagaggtgaatggccagcgcgtcgaactggccgcggtatccatgggcaatccc
catggcgtgctgcgcgtcgagaatgtcgacagcgcaccggtacacagcctcggtccgcaa
ctggaagtccatccgcgcttcccgaagaaggccaacatcggcttcctccaggtgctcgat
ccgcaccatgcgcgcctgcgcgtctgggaacgcggcgtcggcgagacccaggcctgcggc
accggcgcctgcgccgcggcggtcgccgggatccgccagggctggctgcaatcgccggta
cagatcgatctccccgggggacgcctgcacatcgagtgggcaggccccggccagcccgtt
atgatgaccggacccgccgtccgcgtgtacgaaggccaggtccgcctgtaa
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