Paraburkholderia sp. PGU19: PPGU19_003360
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Entry
PPGU19_003360 CDS
T11835
Name
(GenBank) nucleotide-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
papg Paraburkholderia sp. PGU19
Brite
KEGG Orthology (KO) [BR:
papg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
papg03019
]
PPGU19_003360
Messenger RNA biogenesis [BR:
papg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PPGU19_003360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_22
AAA_18
AAA_16
AAA_28
nSTAND_NTPase5
AAA_29
SLFN-g3_helicase
FtsK_SpoIIIE
T2SSE
CoaE
Motif
Other DBs
NCBI-ProteinID:
BCF95767
LinkDB
All DBs
Position
1:complement(372558..373451)
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AA seq
297 aa
AA seq
DB search
MRIILITGISGSGKSVALNALEDAGYYCVDNLPPRFLPELAAYLAGHGQDRLAVAIDARS
GASLDDMPQMIRDLAGQHDVRVLFLNASTQALIQRFSETRRRHPLSGSPAHDADVGVLTS
LAEAIERERELVAGLAEFGHQIDTSNLRANVLRAWVKRFIEQEHTGLALMFESFGFKRGV
PLDADFVFDVRTLPNPYYDRELRPLTGLDKPVIDFLDALPVVQQMIGDIESFLQKWLPHF
RDDNRSYLTVAIGCTGGQHRSVFIAETLAARFASEANVLVRHRDAPINVDDSSKLVA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattatcctgatcaccggtatctccggctccggcaagtctgtcgctttgaacgcg
ctcgaagacgcgggctactactgcgtcgacaatttgccgccgcgctttctgcccgaactc
gccgcgtacctcgcgggccacggccaggaccggctcgcggtggcgatcgacgcgcgctcg
ggcgcctcgctcgacgacatgccgcaaatgatccgcgatctcgccggccagcacgacgta
cgcgtgctgttcctgaacgccagcacgcaggcactgatccaacgcttttccgaaacacgc
cgccgccatccgctgtcgggctcgcccgcacacgatgccgacgtcggcgtgctgacgtcg
cttgccgaagcgatcgagcgcgagcgcgaactcgtcgcggggctcgccgaattcggccat
cagatcgataccagcaacctgcgggcaaacgttttacgcgcgtgggtcaagcgtttcatc
gagcaggagcacacgggcctcgcgctgatgttcgaatcattcggcttcaagcgcggcgtg
ccgctcgacgccgacttcgtgttcgacgtgcgcacgctgccgaatccctattacgaccgc
gaactgcgtccgctgacaggactcgataagcccgtcatcgatttcctcgacgcactgccc
gtcgttcagcagatgatcggcgacatcgaatcgtttctgcagaaatggctgccgcatttc
cgcgacgacaatcgcagttatctcaccgttgcaatcggttgtacgggcggacagcaccgc
tcggtattcatcgccgaaacgcttgccgcgcgtttcgcgagcgaagcaaacgtgttagtg
cggcatcgcgatgcgccgatcaacgtcgacgactcatcgaaactggtcgcctga
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