Paraburkholderia sp. PGU19: PPGU19_013040
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Entry
PPGU19_013040 CDS
T11835
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
papg Paraburkholderia sp. PGU19
Pathway
papg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
papg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PPGU19_013040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
papg03400
]
PPGU19_013040
Enzymes [BR:
papg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PPGU19_013040
DNA repair and recombination proteins [BR:
papg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PPGU19_013040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BCF96735
LinkDB
All DBs
Position
1:complement(1407684..1408460)
Genome browser
AA seq
258 aa
AA seq
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MKLATWNVNSLKVRQQHVIDWLELSQTDVLCLQELKLPDEKFPRAELEEKGYRSWFAGQK
TYNGVGILVRDGMNVDEASIMRNIPGFEDPQQRVIAATIEGVRVISAYFPNGQAPGTDKF
AYKLRWLDALHDWIASELAQHPKLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAQFN
RLVELGLVDSFRLFDQPEKTFTWWDYRMLAFRRNAGLRIDHILLSKPLAASCTHCDVDKT
PRKWDQPSDHAPVVALTE
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagccacgtggaatgtgaactccctgaaggttcgtcagcagcatgtgatcgac
tggctcgaactcagccagaccgacgtgctgtgtcttcaggaactgaaactgcccgacgaa
aaatttccgcgcgcagaactcgaggaaaagggttatcgcagctggttcgccggtcagaag
acgtataacggcgtcggcatactcgtgcgcgacggcatgaacgtcgacgaagccagcatc
atgcgcaacatacccggcttcgaggacccgcagcagcgcgtgatcgcggccaccatcgaa
ggcgtgcgcgtgatcagcgcctacttcccgaacggccaggcgcccggcaccgacaagttc
gcctacaagctgcgctggctcgacgcgctgcacgactggatcgccagcgaactcgcgcag
catccaaagctcgcgctgctgggcgactacaacatcgcgcccgaagaccgcgacgtgcat
gatccgaaggcgtgggaaggacagaacctcgtgtcgccggaagagcgcgcgcagttcaac
cgcctcgtcgaactgggtctcgtcgattcgttccggctcttcgatcagcccgagaagacc
ttcacgtggtgggactatcggatgctcgcgttccgccgcaacgcgggcttgcgcatcgac
catatcctgctgtcgaagccgcttgccgcaagctgcacgcattgcgacgtcgacaagacg
ccacgcaagtgggatcagccgtcggatcacgcgcccgtcgtcgcgctcaccgagtaa
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