Paraburkholderia sp. PGU19: PPGU19_022240
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Entry
PPGU19_022240 CDS
T11835
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
papg Paraburkholderia sp. PGU19
Pathway
papg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
papg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PPGU19_022240 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
papg03400
]
PPGU19_022240 (uvrB)
DNA repair and recombination proteins [BR:
papg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PPGU19_022240 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PPGU19_022240 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
DUF7603
AAA_16
DUF8042
UB2H
Motif
Other DBs
NCBI-ProteinID:
BCF97655
LinkDB
All DBs
Position
1:complement(2435133..2437226)
Genome browser
AA seq
697 aa
AA seq
DB search
MSEHHLSEVHDALDESKFVTFEGSPFRLYQPYPPAGDQPTAIDTLVEGVEDGLSFQTLLG
VTGSGKTYTMANTIARLGRPAIVFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPE
AYVPQRDLFIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSAIYGIGNPSEYHQMIL
TLRTGDKMGQRDIIARLIAMQYNRNEADFARGSFRVRGDTIDIFPAEHAEMAVRVELFDD
EIDTLQLFDPLTGRVRQKIPRFTVYPSSHYVTPRETVMRAVETIKSELRDRLEFFYGDGK
LVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGAAPGEPPPTLVDYLPADAMMFLDE
SHVLIGQLNGMYNGDRARKENLVDYGFRLPSALDNRPLKFNEFERKMRQVVFVSATPADY
EKKTAGQVAEQVVRPTGLVDPEIEVRPARTQVDDVLAEINERVKAGDRVLVTVLTKRMAE
QLTEFLADHGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAI
LDADKEGFLRAERSLIQTIGRAARNVNGKAILYADKITDSMKRAIDETERRRAKQIAFNE
KMGIVPRGVVKRIKDIIDGVYNVDEARAELKEQQVRAKFEDMSEKQISKEIKRLEKQMME
HAKNLEFEKAAQVRDQLALLRERVFGANVGDHLTGTD
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacatcatctgagtgaagtccacgacgctctcgacgaatccaaattcgtgacg
ttcgagggctccccgttccggctttatcaaccgtatccgcccgcaggcgaccagccgacg
gcgatcgacacgcttgtcgaaggcgtcgaggacggtctgtcgttccagacgctgctcggc
gtgacaggctccggcaagacctacacgatggcgaacacgatcgcgcggctgggccggccg
gccatcgtcttcgcgccgaacaagacgctcgccgcgcagctgtactctgagtttcgcgag
ttttttccgcgcaatgccgtcgaatacttcgtctcgtactacgactattaccagccggaa
gcgtacgttccgcaacgcgatctgttcatcgaaaaggactcgtcgatcaacgagcacatc
gagcagatgcgtctgtcggccaccaagagcctgatggagcggcgcgacgtcgtgatcgtc
gcaaccgtatcggcgatctacggtatcgggaatccgtcggaatatcaccagatgattctg
acgctgcgtacgggcgacaagatgggacagcgcgacatcatcgcgcgtctgatcgcgatg
cagtacaaccgcaacgaagccgacttcgcgcgcggctcgttccgcgtgcgcggcgacacg
atcgatatttttccggccgagcatgcggaaatggccgtgcgcgtcgaactgttcgacgac
gaaatcgatacgctgcaactattcgatccgctcacgggccgcgtgcgtcagaagattccg
cgtttcaccgtctacccgtcgtcgcactatgtgacgccgcgtgagacggtgatgcgcgcc
gtcgagacgatcaagtccgagttacgcgaccggctcgaattcttctatggcgacggcaag
ctcgtcgaagcgcaacggctcgaacagcgcacccgtttcgatctggaaatgttgcaggaa
ctgggtttctgcaagggcatcgagaactattcgcggcatttctcgggcgccgcgcccggc
gagccgccgccgacgctggtcgactatctgcctgccgacgcgatgatgttcctcgacgaa
tcgcacgtgctgatcggccagttgaacggcatgtacaacggcgaccgcgcgcgcaaggaa
aatctcgtcgattacggcttccggctgccgtccgcgctcgataaccggccgctcaagttc
aacgagttcgagcgcaagatgcgtcaggtcgtgttcgtgtcggcgacgcccgccgactac
gagaagaagacggcggggcaggtggccgagcaggtcgtgcgcccaacaggtctcgtcgat
ccggaaatcgaggtgcggccggcgcggacgcaggtcgacgacgtgctggccgagatcaac
gagcgcgtgaaggcgggcgaccgcgtgctcgtcacggtgctgaccaagcgcatggccgag
caactgacggagtttctcgccgatcacggcgtgaaggtgcgctatctgcacagcgacatc
gacaccgtcgagcgcgtcgaaatcattcgcgacctgcgcctgggtacgttcgacgtgctg
gtcgggatcaacctgttgcgcgaagggctggacattcccgaagtgtcgctcgttgccatt
ctcgatgccgacaaggaaggtttcttgcgcgccgagcgctcgctgatccagacgatcggc
cgggccgcgcgtaacgtgaacggcaaggcgattctctacgcggacaagatcaccgattca
atgaaacgcgcgatcgacgaaaccgaacggcggcgcgcgaagcagattgcgttcaacgag
aagatgggcatcgtgccgcgcggcgtggtgaagcggatcaaggacattatcgacggcgtc
tacaacgtcgacgaagcgcgcgccgagctgaaggagcagcaggttcgtgcgaaattcgaa
gacatgtccgaaaagcagatctccaaggagatcaagcggcttgagaagcagatgatggag
cacgcgaaaaatctcgaattcgaaaaagcggctcaggtgcgcgaccagcttgcgttgctg
cgcgagcgggtgttcggcgcgaatgtcggcgatcatctgacgggcacggactag
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