Paraburkholderia sp. PGU19: PPGU19_031930
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Entry
PPGU19_031930 CDS
T11835
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
papg Paraburkholderia sp. PGU19
Pathway
papg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
papg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PPGU19_031930 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
papg03021
]
PPGU19_031930 (rpoA)
03400 DNA repair and recombination proteins [BR:
papg03400
]
PPGU19_031930 (rpoA)
Enzymes [BR:
papg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PPGU19_031930 (rpoA)
Transcription machinery [BR:
papg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PPGU19_031930 (rpoA)
DNA repair and recombination proteins [BR:
papg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PPGU19_031930 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
WHD_CHMP7
Motif
Other DBs
NCBI-ProteinID:
BCF98624
LinkDB
All DBs
Position
1:complement(3526693..3527670)
Genome browser
AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVESLGESHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGVVTAGDIELAHDCEV
INPDHVIAHLSKGGKLDVQIKVEKGRGYVPGNVRRYGEESAKIIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETNGVISPEEAIRQSARILVDQLSVFAALEGTEAAAEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgttgaagcccaagatcatcgctgtagaatcgcttggcgaaagccat
gcgaaagtggtcatggaaccgtttgaacggggttatggccacaccttgggtaacgcgctt
cggcgtgtgttgctgtcgtcgatggtgggctacgcgccgaccgaagtgacgatcgcaggc
gtcgtgcacgaatactcgacgctcgatggtgtgcaggaggacgtggtcaacctgttgttg
aacctgaagggcgtggtgttcaagctgcataaccgtgacgaagtgacggttacgctgcgc
aaggaaggcgaaggtgttgtcacggctggcgacatcgaactcgcacacgactgcgaagtg
atcaacccggatcacgtgattgcgcatctgtcgaagggcggcaagctcgacgtgcagatc
aaggtcgaaaagggccgtggctatgtcccgggcaacgtgcgtcgttacggcgaagaatcg
gccaaaatcattggtcgcatcgtgctggacgcgtcgttctcgccggttcgccgtgtgagc
tacgccgtggaaagcgcgcgtgtcgaacagcgtaccgatctcgacaagctcgtgatgaac
atcgaaaccaacggcgtgatttcgccggaagaagcgatccgtcaatcggcgcgtattctg
gtcgatcagctgtcggtgttcgcagcgctggaaggcacggaagcagcggcagaagcaccg
tcgcgcgctccgcagatcgatccgatcctgctgcgtccggttgatgatctcgaactgacg
gttcgttcggcgaactgcctgaaggccgagaacatctattacatcggcgatctgatccaa
cgcacggaaaacgagctgctgaagacgccgaacctgggtcgcaaatcgctgaacgagatc
aaggaagtgctcgcttcgcgtggcctgacgctcggcatgaagctcgaaaactggccgccg
gctggtctcgacaagtaa
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