KEGG   Paraburkholderia sp. PGU19: PPGU19_054920
Entry
PPGU19_054920     CDS       T11835                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
papg  Paraburkholderia sp. PGU19
Pathway
papg02020  Two-component system
Brite
KEGG Orthology (KO) [BR:papg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PPGU19_054920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:papg03021]
    PPGU19_054920
Transcription machinery [BR:papg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PPGU19_054920
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_ECF Sigma70_r4 HTH_24 GerE HTH_23 HTH_Tnp_ISL3 Phage_NinH HTH_40 HTH_7
Other DBs
NCBI-ProteinID: BCG00924
LinkDB
Position
2:complement(2191180..2191692)
AA seq 170 aa
MPADNLSLRLEVEDLYVAHHGWLHTWLRRKLGCAHRAADLAHDTFMRLLARDEPLELLEP
RAFLTTVAQRVLANHWRREQIERAYLEALALVPEPLAPSPEERAVLLETLCEIDALLDGL
PVPVKRAFLMAQLDGATQTEIANTLRISLATVKRYLLKAAAQCFFAMKLE
NT seq 513 nt   +upstreamnt  +downstreamnt
atgccggcagacaatctctcgttgcgtctcgaggtcgaagacctttacgtcgcccatcat
ggctggcttcacacgtggttgcgccgcaagctgggatgcgcgcatcgggcggccgacctt
gcgcacgacacgttcatgcgcctgctcgcgcgtgacgagccgcttgaattgctcgagcca
cgcgccttcctaacgacggtcgcccagcgcgtcctggcgaatcactggcgacgtgagcag
atcgagcgcgcctatctggaagcgctcgcgctggtgccggagccgcttgcgccatcgccc
gaagaacgtgccgtgctgctcgaaacattgtgcgagatcgacgcgttgctcgacggtctg
cccgtacctgtcaagcgcgcattcctgatggcgcaactcgacggcgcgacgcaaacggaa
atcgccaacacgctgcgtatttccctcgcgacggtgaagcgctatctgctgaaagcggcc
gcgcaatgtttcttcgcgatgaaactggagtga

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