Paraburkholderia sp. PGU19: PPGU19_054920
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Entry
PPGU19_054920 CDS
T11835
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
papg Paraburkholderia sp. PGU19
Pathway
papg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
papg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PPGU19_054920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
papg03021
]
PPGU19_054920
Transcription machinery [BR:
papg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PPGU19_054920
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_24
GerE
HTH_23
HTH_Tnp_ISL3
Phage_NinH
HTH_40
HTH_7
Motif
Other DBs
NCBI-ProteinID:
BCG00924
LinkDB
All DBs
Position
2:complement(2191180..2191692)
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AA seq
170 aa
AA seq
DB search
MPADNLSLRLEVEDLYVAHHGWLHTWLRRKLGCAHRAADLAHDTFMRLLARDEPLELLEP
RAFLTTVAQRVLANHWRREQIERAYLEALALVPEPLAPSPEERAVLLETLCEIDALLDGL
PVPVKRAFLMAQLDGATQTEIANTLRISLATVKRYLLKAAAQCFFAMKLE
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgccggcagacaatctctcgttgcgtctcgaggtcgaagacctttacgtcgcccatcat
ggctggcttcacacgtggttgcgccgcaagctgggatgcgcgcatcgggcggccgacctt
gcgcacgacacgttcatgcgcctgctcgcgcgtgacgagccgcttgaattgctcgagcca
cgcgccttcctaacgacggtcgcccagcgcgtcctggcgaatcactggcgacgtgagcag
atcgagcgcgcctatctggaagcgctcgcgctggtgccggagccgcttgcgccatcgccc
gaagaacgtgccgtgctgctcgaaacattgtgcgagatcgacgcgttgctcgacggtctg
cccgtacctgtcaagcgcgcattcctgatggcgcaactcgacggcgcgacgcaaacggaa
atcgccaacacgctgcgtatttccctcgcgacggtgaagcgctatctgctgaaagcggcc
gcgcaatgtttcttcgcgatgaaactggagtga
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integrated database retrieval system