Paraburkholderia sp. PGU19: PPGU19_063720
Help
Entry
PPGU19_063720 CDS
T11835
Symbol
icmF1
Name
(GenBank) type VI secretion protein IcmF
Organism
papg Paraburkholderia sp. PGU19
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
Motif
Other DBs
NCBI-ProteinID:
BCG01804
LinkDB
All DBs
Position
PPGU19_p1:complement(432603..436130)
Genome browser
AA seq
1175 aa
AA seq
DB search
MKLLGWFMRPIVLSLLGVLALALIVWIEGPLLAFAGKAPLETAASRWIVIAVLFALWVLY
WGVRWLIVRLANVKFTRVVAEEAPQPGRKESEADVAALKQRFDEAMAILRKARVKGRFGS
QYVYQLPWYMFVGAPGTGKTTALLHSGLKFPLADRLGKQAVGGVGGTRNCDWWFTDDAVL
LDTAGRFTTQDSFAEADQAAWGGFLQLLRKYRPRRPLNGVIVALSVQDLLQLSDTQRAVQ
AGAVRERLKELYTRLGMRFPVYVVVTKCDLLAGFAEFFDDLGRDEREQVWGVTFPYVAQG
GPDEALASFPGEFAALEKQLQARVLHRMQQETDTRRRALVYGFPQQFAGLENMLTGFLQE
TFSTSRFDEAALLRGVYFTSGTQEGRPIDRVMSAVAAALGLQRQVVLPDPASGRAYFITR
LMRDVIFQEAGLAGTNPKLERRRTWLQRIALGLIGIAVVLALVLFFVSYQRNRAYIANVE
QHVTELQKLAQNTRAGDDPLLLLPLLNAARDLPGGYADRNRSVPWLSRLGLYQGDKLGLE
AQASYRRLLKQTLLPLVVHRMEDELRRGDANNPDFQYEVLRAYLMLGDSAHFDADSVRLW
ADIDWRRGPLSNASDDQRNDIDGHLAALFQPAQFDASLPLDKDLIAQARTTLAKMPLAQR
MFNRVARDLEQAKLPPFSVAAAAGRNASLVLVRKSGAPLTRGVSGAYTRAGYQKFGQLRD
EAVVDVARDNWVLGREESVLTPNGIDDLKSAMTQLYYDEYIKQWDALLADVAVVPFDGVE
KGARVANVLAAPDSPLKAFMVAASQETTLGTVKTGGSLAEQGAAVLGNKLDAVKKRLENA
LGSQPDDAAPPPAQVNPVDAHFQALHDLAGKPGAAGPVPLDTQLAALKDAASYLEASDAA
RKQGLPAPPGDALNKLKLVAQGAPAPLAGIANDIASGGSMLMIGGERARLNALWQANVAQ
LCRQALDGRYPLVRGSNRDAAPDDFSRILGPGGLIDDFFQKNLATLVDMSGPQWRWRTGA
DSLGIPADVLAQFQRAAQIRDAFFRAGGRDVSVRFTLKVLDIDPAIDHATIDIDGQQLVA
AHVDQSMVFQWPSGKGTGQAHVDFDPSGDSARADGPWALLHLVDNARLQPTAQADRFKMT
FESDGHPLVLQLDASSVTNPFRRGVFEQFRCPDRL
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcttggctggttcatgcggccgatcgtgctgtcgttgctcggcgtgctggcg
cttgcgctgatcgtctggatcgaagggccgttgctggcgtttgcgggcaaggcgccgctc
gaaacggccgcgagccgctggatcgtgatcgcggtgctgttcgcactgtgggtgctctac
tggggcgtgcgctggctgatcgtgcggctcgcgaacgtgaaattcacgcgggtggtcgcc
gaggaggcgccgcagcctggcaggaaagaatcggaagccgatgtcgccgcgctgaagcag
cgcttcgacgaggccatggcgatcctgcgcaaggcacgcgtcaaggggcgcttcggtagc
cagtacgtctaccagttgccgtggtacatgttcgtcggcgcgcccggcaccggcaagacg
acggcactgctgcattcgggcctcaagtttccgctcgccgaccggcttggcaagcaggca
gtgggcggtgttggcggcacgcgtaattgcgactggtggttcaccgacgatgccgtgctg
ctcgacacggccggccgcttcaccacgcaggacagcttcgccgaagcggatcaggccgca
tggggcggctttctgcaactgttgcgcaaataccggccgcggcggccgctgaacggtgtg
atcgtcgcgctgtcggtgcaggatctgctgcagctgtccgacacgcagcgcgcggtacag
gcaggcgcggtgcgcgaacgactcaaggagttgtacacccgccttgggatgcgctttccc
gtctacgtggtcgtgacgaagtgcgacctgctggcggggttcgcggaattcttcgacgac
ctcggccgtgacgagcgcgaacaggtgtggggcgtgacgttcccttacgttgcgcagggc
ggcccggacgaagcgctggcgtcgttccccggcgagttcgctgcgctcgaaaagcagttg
caggcacgtgtgttgcaccgcatgcagcaggagaccgacacgcgccggcgtgcgctcgtg
tacggttttccgcagcagttcgccggcctcgaaaacatgctgacgggcttcctgcaggaa
acgttcagcacgtcgcgcttcgatgaggcggcactgctgcgcggcgtctacttcacgagc
gggacccaggaagggcggccaatcgaccgcgtgatgagcgcggttgcggcggcactcggc
ttgcagcgtcaggtcgtgttgccggacccggcaagcggacgggcgtacttcatcacgcgg
ctgatgcgcgacgtgatttttcaggaagccgggctggcaggcaccaacccgaaactggag
cgccgccgcacgtggctgcagcgcatcgcgctagggctgatcggcattgcggtggtgctc
gcgctggtgctgtttttcgtcagctatcagcgcaaccgcgcttacatcgccaatgtcgag
cagcatgtgaccgaactgcagaagctcgcgcagaacacccgcgcgggcgacgatccgcta
ttgctgctgccgttgctcaatgcggcccgcgacctgcctggcggctacgcggatcgcaac
aggagcgtgccgtggctgtcgcggctcggtttgtaccagggcgacaagctgggcctcgaa
gcgcaggcgagctaccggcgtctgctgaagcagaccttgctgccgctcgtcgtgcacagg
atggaagacgaactgcggcgcggcgacgcgaacaatcccgacttccagtacgaggtgctg
cgcgcgtatctgatgctcggcgattcggcccacttcgacgccgattccgtgcggctatgg
gccgacatcgactggcggcgcgggccgttgagcaatgcgagcgacgatcagcgcaacgac
atcgacggtcatctcgcggcgctgttccagcccgcgcagttcgacgcgtcgctgccgctc
gacaaggacctgatcgcgcaggcgcgtacgacgcttgcgaagatgccgctcgcgcaacgc
atgttcaatcgtgtcgcgcgcgatctcgaacaggccaagctgccgccattcagtgtcgcg
gccgccgccggtcgcaacgcgtcgctggtgctcgtcagaaagagtggtgcgccgctgacg
cgcggcgtctcgggcgcctatacgcgtgcgggctatcagaagtttggccagttgcgcgac
gaagccgtagtcgatgtcgcgagagacaactgggtgctcggtcgcgaggaatccgtgctg
acgccgaatggcatcgacgatctgaagtcggcgatgacgcagctgtactacgacgagtac
atcaagcagtgggacgcgctgctggcggatgtcgccgtggtgccgttcgatggcgtggag
aagggcgcgcgcgtggcgaacgtgctggccgcgcccgattcgccgttgaaggcgttcatg
gttgctgcctcccaggagaccacgctcggcacggtgaagacaggtggctcgctggcagaa
cagggcgccgcggtgttgggcaacaagctcgatgcggtgaagaagcggctcgaaaacgct
ctcggcagccagccggacgatgcggcgccgccgcccgcgcaggtcaatcccgtcgatgcg
cattttcaggcgctgcacgacctcgcgggcaagcccggtgcggcgggtcccgtgccgctc
gatacgcaactcgcggcgctcaaggacgcggcgtcgtatctcgaagcgtccgacgcggcg
cgcaagcaaggactgcccgcgccgccgggcgacgcgctgaacaagctgaaactcgtcgcg
cagggcgcgcccgctccgcttgcgggcatcgccaacgacatcgcgagcggtggctcgatg
ctgatgatcggcggcgaacgtgcgcgcctgaatgcgttgtggcaggccaatgtcgcgcag
ctttgccggcaggcgctcgatggccgctacccgctggtacgcggctccaaccgggatgca
gcgcccgacgacttcagtcggatactcgggccaggcggcctgatcgacgattttttccag
aagaacctggccaccctggtcgatatgtcggggccgcaatggcgctggcgcacgggcgcc
gattcgctcggcattccggcggacgtgctggcgcagttccagcgggccgcgcagatcagg
gatgcgtttttccgagcgggaggacgcgacgtgtcggttcgcttcacgctcaaggtgctc
gatatcgatcctgccatcgaccacgccacgattgatatcgacgggcagcaactggttgcc
gcccacgtggatcaatcgatggtgttccagtggccgagcggcaaaggcaccggacaggcg
catgtggatttcgacccatcgggggattccgcgcgcgcggatggaccatgggcgctgctg
catctggtggacaacgcgcgcttgcagccgaccgcgcaagcggaccgcttcaagatgact
ttcgaatccgacggacacccgctcgtgcttcagcttgacgctagcagcgtgacgaatccg
ttccgtcgcggggtgttcgaacagttccgttgtcctgaccggttatga
DBGET
integrated database retrieval system
