Paraburkholderia sp. PGU19: PPGU19_070000
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Entry
PPGU19_070000 CDS
T11835
Name
(GenBank) DNA helicase
Organism
papg Paraburkholderia sp. PGU19
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4011
MTES_1575
DUF3320
AAA_12
AAA_11
AAA_19
AAA_30
DUF559
SLFN-g3_helicase
UvrD-helicase
Adeno_IVa2
AAA_16
DEAD
AAA_5
NPHP3_N
nSTAND3
AAA_22
DUF553
Transglut_core
ResIII
MeaB
IstB_IS21
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
BCG02432
LinkDB
All DBs
Position
PPGU19_p1:complement(1137334..1143249)
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AA seq
1971 aa
AA seq
DB search
MDIQQEPDLESGAVEEKTPLLLEIEADPTLGYASIQNSVPVVRALRVTNRGSEPLETVEV
LVGCNPRFAQGVKLHFAKLAPNESRRISPLDLAPDHSYLADLQEAVTALLTVVAQAGEIE
LARISLPLEILAYDQWAGTRAMPELLACFSMPNNPAIDILIGKASKLLREQHSDLSMNGY
QSKSRDVVWKQISAIYSTLAAENLQYAEPPASFGIDGQKIRTPDRVIEGRVATCLDLAML
FSSCLEQAGLRSVVLIKDGHAWVGVWLHQACFPDPLTDDVQAVRKRGDSGEFLVFETTAV
AQHSGRRPSLRIALEQGAAHLLEEGTFRYAVDIHRARELQIRPLPSRVTGIKRSETDDAD
EPAAIEPTPILPPLDPEFLTPLDLTGDETPEGRLSKWKSRLLDLTLRNRLLNFKSTKSTL
ALVAPDLGKLEDAIAEGVEFRVRALPTLMEGNDPRMAEVHASRSGRQPIDDMALNALDNK
ELIARMPQETLDGNLLSIFSAARTGLEEGGANTLYLALGMLRWAETESADSVHQAPIILV
PVTLQRQSVRSGFRLSRHDDETIINPTLLQMLRSSFELRIPGLDVLPTDEKGVDVGKVLQ
AFRLAVREIPKWEVVEQAHLGIFSFTKYLMWKDLQDRTEQLKANRVVRHLIDNPGRAFEK
EEGDERFERLDETHKPQDLYTPMLSDSSQLKAICVVDSGRDLVLEGPPGTGKSQTITNLI
SHLLARGKTVLFVSEKMAALEVVHRRLESVGLGPFCLELHSSKARKSEVLQQLGKALDFS
GQRTSEDWSREAERLGHLRQELNGLVDALHRPHSNGLTVYQAIGTCIEHAGEEASLMPWA
DASAHDHKSLESLRETSRRMATLSGALVALHGHPLEHIGRIDWSPSWQDELLTVARSLEQ
AIQTFKSRAAEAESSLGLPVSGLSLEGYEKVDRLADVLLGAPQVPQGVAAQAYDAEVRAQ
LQRLARHGKARNESWSNLETGWTERLSEISAKTLTDEWAQAANTWWPKSAIKKRAIRTRL
ASYSATGARPTDEAVVAMLPHLAGVNAEDEQLLALKGNAERVLQDTFNGVETDWDQVLRC
EQWAQRFSDAVTLVAGDPAAAAELRTRFQNLVVENRALLQPGSPLSKSLVAYRDAWREVR
ARLSALEALAEPTAPLQGPADTEGALERVLGVTAEWQRAKSQFMSWCLWRQVREQAVHLG
LQGVVTSLEGGRVPLDRVEEHFEYSYQSWWVKKIIDKDSVLRTFSSADHERKIREFRQSD
ERFQNLTAQYVAAMLAGKVPAGKGMVVSGESELGLLRRELQKKTRHAPVRQLMHGLPSLL
PKLKPCLLMSPLSVAQYLDAGHAQFDAVVFDEASQIPVWDAVGAIARGKQLVVVGDTKQL
PPTSFFSKSTESDDNGGDDAQIEDLESILDECLGAGMNRQRLQWHYRSRHESLITFSNVT
YYDSQLITFPSPVTDDVAVRLERVAGVYDRGGSRTNRAEAEAIVRGIEQHYLDSSQRHLT
LGVVTFNQPQQSLIESLLDARRRANAALDKAMSAQSREPLFIKNLENVQGDERDVIFFSI
TYGPDAAGKITMNFGPLNSEGGQRRLNVAISRARERVIIFSTLRPEQIDLSRVRAAGVRD
LKHYLEFALKGPKALLEQSLPTGMEPDSPFESQVIKVLRDHNWIVHPQVGCSGYRIDIGV
VDPRAPGRYLIGIECDGKAYHSGATARDRDRLRQVVLEGLGWRLHRIWSTDWWLNPDVEV
QKLLTRLNKVLDDDVDEEAPAAESLPEAMEAEIVDSVPSSVVATDIGVSLPKYKIVVPAG
GKPEDFYDLTHGRKLTEQLIEVIEAEGPIHENVLHRRVARAWGLERTGTRIVDRLRMLTP
REHGRTSDGNATFYWPANINPGEWSAFREASDEESSRRKVDDVCLEELANGVLHVLEEMG
SAPTSDVARSVCRLIGMSRTPGDAEARVGLAISRLVTTGSVIASENLLRLS
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atggacatccaacaagaaccggacctcgaatccggagccgtcgaggaaaagacgccgctg
cttctggagatcgaggccgatcctacgctgggttatgcgtcgatccagaattccgtgccc
gtagttcgtgccttgcgcgtaacgaaccgtggcagcgaacctctcgagaccgtcgaggtt
ctggtcggttgcaatcctcgcttcgcacaaggcgtgaaacttcattttgcgaagctcgct
ccgaacgaaagcaggcgcatatctcctttagacctggcaccagatcacagttatcttgcc
gacctccaggaggcagtaactgcgttgctcacggtggtcgcgcaggcgggcgagatcgaa
ctcgcacgtatcagtctccccctcgagattctggcctacgaccaatgggccggaacacgc
gccatgcccgagttgctcgcgtgcttctcgatgccgaacaacccggcaattgacatcctc
attggcaaggcgtcgaagctgcttcgcgagcagcacagcgacctgtccatgaacgggtac
cagtcgaagagtcgcgacgtggtgtggaagcagatctccgcgatctacagcacgctcgct
gcagagaatctgcaatacgccgaaccgccggcttcgttcggaatagatggtcagaaaatc
cgtaccccagatcgggttatcgagggaagggtagcaacttgccttgacctcgcgatgctg
ttctcgtcctgtctcgagcaggctggtcttcgctccgtcgtcttgatcaaggatggtcat
gcctgggtaggcgtatggcttcatcaggcctgtttcccggatccgctcaccgatgacgtt
caggcagtacgcaagcggggcgatagcggagagtttctggtattcgagaccacggcggtc
gcccaacactcgggccggcgcccgtccctgcgaatcgccctggaacaaggcgcggcccat
ctgctcgaggaaggcacattccggtacgcggttgatattcatcgtgctcgtgagttgcaa
atcaggccattgccatcccgggtcacaggcattaaacgatccgaaaccgacgatgcggac
gagccggcagccattgaaccgacgccgattctcccgccgcttgacccggagtttctgacg
ccgctcgatctaactggcgacgagacaccagaaggccgtctgtcgaagtggaaatcgcgg
ctgctggatttgacgctgcgcaaccggcttctcaacttcaaatcgaccaaatcgacgctc
gcgctggtcgcccccgaccttggcaagctcgaagacgctatcgccgaaggcgtcgagttc
cgcgtccgggcgttgccgactttgatggaagggaatgatcctcgcatggccgaggtccat
gccagtcgcagcggacgccaacctattgacgatatggcgctcaacgccttggacaacaag
gagttgatcgcgcggatgcctcaggagaccctggatggcaatcttctgagtatctttagt
gccgcgcggactggtctggaagagggcggcgcgaatacgctctatctcgccttgggcatg
ctgcggtgggcggagacggagagcgctgacagcgtacatcaggcgcctatcatcctggtt
cccgtgacgctacagcgccagtcggtccgaagcggcttcaggcttagccgtcatgacgat
gagacgatcatcaatccaacgctgctgcagatgttgcgctcgagcttcgagttgcgcatt
ccagggttggatgtcttgccgacggacgagaagggcgtcgacgtcgggaaggtactgcag
gcattccgtctggccgttcgcgaaatccccaagtgggaggtcgttgagcaggcccatctt
ggaattttctctttcaccaagtatctgatgtggaaggatctccaggaccggacggagcaa
ctcaaggcgaatcgcgtagtccggcatctcatagataaccccgggcgagcatttgagaaa
gaagagggcgacgaacgtttcgagagattggacgaaacgcacaagccccaagacctgtac
acgccaatgctgtctgactcatcgcagttgaaggctatctgcgtggtcgactccgggcgt
gatctggtactcgagggcccgcccggtacgggtaaaagccagaccatcacaaacctgatt
tcccatttgctggctagaggtaagacagtcctgttcgtatccgagaagatggccgctttg
gaggtcgtgcatcgccggctggaatcggtcggtctggggccgttttgccttgaattgcat
tcgtccaaagcacgcaagtcggaagtcctgcagcagctcggcaaggctttggatttcagt
ggccagcgcacaagcgaagactggagtcgggaagcagaacgtctgggccacctgcggcag
gaattgaacggcctggtagacgcattgcataggccacattccaacgggctcaccgtatat
caggccatcggaacctgcatcgagcacgccggcgaggaagcctccctgatgccttgggca
gatgcatccgctcacgaccataagtccctcgaaagcctgcgagaaacatcgagacggatg
gcgaccctctcgggggcgctcgtcgcgctgcatggtcatccgctcgagcatattggaaga
atcgactggagtccgagctggcaggacgaacttctgacagtcgcgcggtctctggaacag
gcgatccagacgttcaagagtcgtgcagccgaggcggaaagcagcttgggactcccggtt
tccgggttaagcctggagggatacgaaaaggttgaccggttggcagacgttctcctcgga
gcaccgcaggtgcctcaaggcgttgccgcacaagcttacgacgctgaagttcgggcacaa
ctgcaacggcttgcccggcatgggaaggcgcgcaacgagtcatggagcaatctcgagacc
ggttggaccgagcggctctcagaaatcagcgcgaaaacgcttacggacgagtgggcacaa
gctgcgaacacctggtggcctaaatctgcgattaaaaagcgtgctatccgcacgcgcctt
gcgagctatagcgctacaggggcgcgcccgacggacgaagctgttgtggcaatgttgccc
catcttgcaggcgtcaatgccgaggacgagcagcttctcgcgttgaaaggcaacgccgaa
cgtgtgctgcaggatacgttcaatggcgtagagaccgactgggatcaggtgttgcggtgc
gagcaatgggcgcaacgtttctcggatgcagtcaccctggttgctggagatccggccgcg
gcagcagaactgcgaacgcgttttcagaatctggtggttgaaaaccgtgcattgctacag
ccgggaagcccattgagtaaatcgctggttgcctatcgcgatgcgtggcgcgaagttcgt
gcgaggctatcggcgctggaagcacttgccgaaccgactgcaccgttgcaggggccagcc
gacacggaaggcgctctggagcgggtgctcggtgttaccgcggagtggcaacgtgcgaag
agccagtttatgtcctggtgtctgtggcggcaggtccgagagcaggccgtacatctgggg
ttgcaaggcgtcgtaacttctctggaaggcggccgtgtgccgctggatcgcgtagaggag
cacttcgagtacagctaccagagttggtgggtgaagaagatcatcgacaaagactcggta
ctgcggaccttctccagcgcagaccacgaacgaaagattcgtgagttccgccagtccgat
gagcgattccagaatctgacggcgcaatatgttgcggcgatgcttgctggcaaggtacct
gcgggcaagggcatggtagtgagtggcgaaagtgaactggggctgttgcggcgggagctg
caaaagaagacacgccatgcgcctgtacggcaattgatgcacgggcttccgagtctgctt
cccaagctgaaaccctgccttttgatgtcgccgctatctgtggctcagtatctggacgcg
ggccacgcacagtttgacgccgttgtcttcgatgaggcgtcccagattcccgtgtgggac
gccgtgggtgccatcgcacgcggcaagcaactggttgtggttggagacacgaagcaacta
ccgcctaccagcttctttagcaagtcgacggaatcggacgacaacggcggcgatgacgcg
cagattgaagacctcgaaagcattctggacgaatgcctgggcgcagggatgaatcgtcag
cggctccagtggcattaccgcagccgtcacgagagtctgattaccttcagtaacgttacc
tactatgactcgcaactcatcacctttccgtcgcctgtgacggatgatgtggcagtgcgc
ctcgagcgcgtcgcgggtgtctacgaccggggtggaagccggacaaaccgtgcagaggcc
gaggcgatcgtgcgcgggatcgagcaacactacctggattcgagccagcgacatctaact
ttgggcgttgtcacattcaaccagccgcagcagtcgctcattgagtcgctgctagacgcc
cgtcgccgggccaatgcggcgctcgacaaggcgatgtctgcgcagtcgcgcgagccgttg
ttcatcaagaacctggagaacgttcagggcgatgagcgcgacgtcattttcttctcgatt
acctacggtccagacgcagccggaaaaatcaccatgaacttcggcccgctcaacagcgag
ggtggtcagcgtcgactcaatgtggcgatttcccgtgcgcgcgaaagagtgatcattttc
agcaccttgcgaccggagcagatcgacctttcccgcgtgagagctgcgggtgttcgcgac
ctgaagcactatctcgagtttgcactgaagggaccgaaggcgttgctggagcaatcgttg
cctaccgggatggagccggacagtccgttcgagagccaggtcatcaaggtgctacgcgac
cacaactggattgttcaccctcaggtaggctgttctggctatcgcatcgacattggtgtc
gttgatcctcgtgcaccgggccgatatctcatcgggattgaatgcgacggtaaagcatat
cactcgggtgcgacagcgcgcgaccgcgaccgacttcgtcaggtggtgctcgaagggttg
ggatggcgcctacatagaatctggtcgaccgactggtggttgaatcccgacgtggaggtc
cagaagctgctcacgcgattgaacaaggtgctggacgacgatgttgacgaagaggccccg
gctgcggagtctctcccggaggcgatggaggcagagatcgtcgacagcgttccttcgtcg
gtcgttgcaacagacattggcgtatctctgcccaagtacaagatcgtcgtcccggcggga
ggcaagccggaagacttttacgatctaacccacggccggaagctaacggagcaactgatc
gaggtaatcgaagctgaagggccgatccacgaaaatgtccttcatcgccgggtggcgaga
gcgtggggtttggaacgcacgggtacgcgaattgtcgatcgactccggatgctaacgcct
cgcgaacacggtcgaacttctgacggaaacgcgacgttctactggccggcaaacatcaat
ccgggagagtggagcgcctttcgtgaggcctcggacgaagaaagttcgcgtcggaaagtc
gatgatgtgtgtctggaggaactagctaacggtgtgcttcatgtgcttgaagagatgggc
agcgcaccaacctcggacgtcgcgagatctgtgtgtcggctgattggaatgtcgcgcaca
ccgggagatgccgaagctagggttggacttgcaatttcccgtctcgtgacgacgggaagc
gtgatcgcgagtgagaacctgctgagactttcgtag
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