Pandoraea apista: SG18_01075
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Entry
SG18_01075 CDS
T03588
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
papi
Pandoraea apista
Pathway
papi00260
Glycine, serine and threonine metabolism
papi00460
Cyanoamino acid metabolism
papi00630
Glyoxylate and dicarboxylate metabolism
papi00670
One carbon pool by folate
papi00680
Methane metabolism
papi01100
Metabolic pathways
papi01110
Biosynthesis of secondary metabolites
papi01120
Microbial metabolism in diverse environments
papi01200
Carbon metabolism
papi01230
Biosynthesis of amino acids
papi01240
Biosynthesis of cofactors
papi04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SG18_01075 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SG18_01075 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SG18_01075 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SG18_01075 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SG18_01075 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SG18_01075 (glyA)
Enzymes [BR:
papi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SG18_01075 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AJE97118
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Position
complement(2234490..2235737)
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AA seq
415 aa
AA seq
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MFDKSKSTVAAVDPDVWAAIQKENQRQEDHIELIASENYTSPAVMEAQGSQLTNKYAEGY
PGKRYYGGCEYVDIVEQLAIDRVKALFGAEAANVQPNSGSQANQGVYFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNEQEDIDYDAAEKLAQQHKPKMIVAGASAFAL
KIDFERMSKIAKSVGAYFMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEFEKPINSAIFPGIQGGPLMHVIAGKAVAFKEAASPEFKAYQEQVAKNARVMAETL
VKRGLRIVSGRTESHVMLVDLRAKNITGKAAEAALGEAHITVNKNAIPNDPEKPFVTSGV
RLGSPAMTTRGFKEAEAELVGNLIADVLDNPEDAENLARVRAQVAELTKRFPVYG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaaatcgaaatctaccgttgccgccgtcgatcccgacgtctgggccgcgatt
cagaaagaaaatcagcgtcaggaagatcacatcgagctgattgcttcggaaaattacacc
agcccggccgtgatggaagcgcagggctcgcaactgaccaacaagtatgcggaagggtat
ccgggcaagcgctattacggtggttgcgagtatgtcgacatcgttgagcaactggccatc
gatcgtgtgaaggcgctgttcggtgcggaagccgcgaacgtgcagccgaactcgggctcg
caggccaaccagggtgtgtatttcgccatgctcaagccgggcgacacgatcatgggcatg
agcctcgcgcacggcggtcacctcacgcacggttcgccggtcaacatgtcgggcaagtgg
ttcaacgtggtgagctacggcctgaacgagcaagaagacatcgattacgacgctgccgag
aagctcgcgcagcaacacaagccgaagatgatcgtggcgggcgcatcggccttcgccctg
aagatcgacttcgagcgcatgtcgaagatcgccaagtcggttggtgcgtacttcatggtc
gacatggcgcactacgccggtctgatcgccgctggcgtgtacccgaacccggtgccgcac
gccgacttcgtgaccacgaccacgcacaagagcctgcgcggcccgcgcggtggcgtgatc
ctgatgaaggcggaattcgagaagccgatcaactcggcgatcttcccgggcattcagggt
ggtccgctcatgcacgtgattgccggtaaggctgtcgcgttcaaggaagctgcctcgccg
gaattcaaggcctatcaggaacaagttgcaaagaacgctcgcgtgatggccgaaacgctg
gtcaagcgcggcctgcgtatcgtgtcgggccgcaccgaatcgcacgtcatgctggtcgac
ttgcgtgccaagaacatcactggcaaggcagcggaagccgcgctgggcgaggcgcatatc
accgtcaacaagaacgcgattccgaacgacccggagaagccgttcgtgacgagcggtgtg
cgcctgggctcgccggccatgaccacgcgcggtttcaaggaagccgaagcggaactcgtc
ggtaacttgatcgccgacgtgctcgacaacccggaagacgctgaaaacctggcccgtgtg
cgtgcacaagtggctgagttgaccaagcgtttcccggtctacggctaa
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