Pandoraea apista: SG18_01270
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Entry
SG18_01270 CDS
T03588
Name
(GenBank) ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
papi
Pandoraea apista
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
papi02000
]
SG18_01270
Transporters [BR:
papi02000
]
Other transporters
Pores ion channels [TC:
1
]
SG18_01270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
Exotox-A_bind
Motif
Other DBs
NCBI-ProteinID:
AJE97146
LinkDB
All DBs
Position
complement(2276458..2278569)
Genome browser
AA seq
703 aa
AA seq
DB search
MSFTANSAFAQSVPAKVAAAEVADAATSTADASAQATLKATTVTSSALRETPQNLKQPVQ
SGALGSRSQLDTPFSTTVVSQEQLEQRQPAKLGEVFSTDASVTDGSNAFDAWAGYVYVRG
MPIDWQYGFKLDGLPVMTYGVTMPYEQFDRVELLKGLSGFMYGFVAPGGVVNYVTKKPTD
ERIASVDLGFHSDGIWREHVDLGGRAGPNDMFGARLNYTHEEGRTYTDGNLNRDTVSVAL
DARITRDLTWNFGAMYQDRRATGTSPSLSTFNFSGNQLPGPINVSNANLQTQATHLNTIT
QFYTTGLQYQIDPDWKVSANYAFNKSTRDRNEATLYLLNGAGNFSGQNDLGDENNTFRAW
QLTAEGKVRTGPFAHQLTFGIASQYQTNDYAYIYSPTYTGNLYQGTSYQYYGDGTTLKAQ
RSSAIEQRSVFASDTVQITERLSVLGGVRFTNYNQTNAQGISTYSTNGVFTPTLAVMYKV
APNTTAYASYVEALEAGEVVGAAYANAGAVLNPFKSRQYELGVKTEQDTWSTTAALFRIE
RGAVYTNSANARVADGQSIYQGIELAGSVKLGPQWTLGASAMALDSWYARTNGFDGNRVG
GAPRFVLSGNLEYKVPYVPGLSVGGDIRYNGRTSLNPQNSLTVSGYTLINLGATYRTRVA
GKDVTLRAAVSNLTNRKYWQYQYDNYIKAADPRMVSLNAKIDF
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
ctgtccttcacggccaactcggccttcgctcagtcagtgcccgctaaggtagcggcggcg
gaggtggcagatgccgccacgtcgaccgccgacgcctctgcccaggccacgctcaaggcc
acgaccgttaccagctcggccttgcgcgaaacgccccagaatctcaagcagccggtgcaa
tccggcgcgctcggctcgcgtagccagctcgatacgccgttctcgacaaccgtggtgagc
caggagcaactcgaacaacgccagccggccaagctcggcgaagtgttctccaccgatgcc
tcggtgaccgacggcagcaatgccttcgacgcatgggccggctacgtttacgtgcgcggc
atgccgatcgactggcaatacggtttcaagctcgacggcctgccggtgatgacctacggc
gtgaccatgccgtatgagcagttcgatcgcgtggaactgctcaaggggttgtcgggcttt
atgtacggcttcgtcgcgccgggcggcgtggtgaactacgtgacgaagaagccgacggac
gagcgcattgccagcgtcgatctcggtttccattccgacggcatctggcgcgagcacgtc
gatctcggtggccgtgccgggccgaacgacatgttcggcgcacgcctgaactacacgcac
gaagaaggccgcacatacaccgacggcaacctgaatcgcgacacggtatcggtcgcgctc
gacgcacgcattacccgcgatctcacgtggaacttcggtgcgatgtatcaggaccgtcgc
gcgacaggaacctcgccgtcgctctcgactttcaacttctcgggcaaccaactgcccggg
ccgatcaacgtgtccaatgcgaatctgcaaacgcaagccacgcatctgaacacgatcacg
cagttctacacgacgggcctgcaataccagatcgatccggattggaaggtatcggccaac
tacgcgttcaacaaatcgacgcgtgaccgaaacgaagccacgctgtatctgctcaacggc
gccggcaacttcagcggtcagaacgatctgggcgacgagaacaacacattccgcgcatgg
caattgactgccgaaggcaaggtgcggaccggcccgttcgcgcaccagttgacgttcggc
atcgcctcgcagtatcagacgaacgactacgcctacatctacagtccgacgtacacgggc
aatctgtatcaaggcacgtcgtatcagtactatggcgatggcacgaccctcaaggcgcaa
cgctccagcgccatcgagcaacgctcggtctttgcctctgacacggtgcagatcacggag
cgtctgtcggtacttggcggcgttcgcttcaccaactacaaccagacgaacgcgcaaggc
atctcgacctactcgacgaacggcgtgttcacgcccacgcttgccgttatgtacaaggtc
gcgccgaacacgacggcctatgcgagttacgtggaagcgctcgaagccggcgaggtcgtg
ggggcggcctacgccaatgcgggagcagtgctcaatccgttcaagagccgtcagtacgaa
ctcggcgtgaaaaccgagcaggacacctggagcacgacggcagcactgtttcgcatcgaa
cgcggcgccgtgtacaccaacagcgccaatgcgcgcgtggcagacggccagtcgatctat
cagggtatcgaactggccggctcggtcaagctggggccgcagtggacgctgggcgccagc
gccatggcactcgatagctggtatgcgcgcacgaacggtttcgatggcaaccgcgtgggc
ggcgcaccgcgtttcgtgctctcgggcaacctcgagtacaaggtgccgtatgtgccaggg
ctctcggtgggaggcgacatccgctacaacggccgcacgtcgctcaatccgcagaactcg
ctgacggtatcggggtacacgctgatcaatcttggcgccacgtaccgcacgcgtgtggcc
ggcaaggacgtgacgttgcgcgccgccgtgagcaacctcacgaatcgcaagtactggcag
tatcagtacgacaactacatcaaggcggccgatccgcgcatggtcagcctgaacgccaag
atcgatttctga
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