Pandoraea apista: SG18_01470
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Entry
SG18_01470 CDS
T03588
Name
(GenBank) IclR family transcriptional regulator
KO
K20539
IclR family transcriptional regulator, blcABC operon repressor
Organism
papi
Pandoraea apista
Pathway
papi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SG18_01470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
papi03000
]
SG18_01470
Transcription factors [BR:
papi03000
]
Prokaryotic type
Helix-turn-helix
IclR family
SG18_01470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
Dimerisation
Rrf2
HTH_20
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
AJF00629
LinkDB
All DBs
Position
complement(2316358..2317104)
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AA seq
248 aa
AA seq
DB search
MVRAVHILDVIAASSEPVALADLARETGVPKSTLHGLCDTLVKLRLVKRHANGGMTMGSY
VMGWANAFLSQTNITEEFRAVWEASRAFAQETVTLSVLDGADVIYLACHNGNRPLGVTFR
IGMRLPAPYTATGKAMLSTLPPGEVADLLTGAWPAPLTRASVSSYSALADEMAQVRRDGY
SIDNGQMREGMICFGAPVFDASGERAVAGLAVSFLTNEIDSETGQRIGRQMRELADQLSV
RLGASARR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtggtgcgggcggtgcacatcctcgatgtgattgcggcgtcgtccgagccggtggcgctg
gccgatctggcgcgcgagaccggggtgcccaagagcacgctgcacggtttgtgcgatacg
ctggtcaagctgcggctggtcaagcgtcacgccaatggcggcatgacgatgggctcgtac
gtgatggggtgggcgaatgcatttctgtcgcagaccaacattaccgaggagttccgagcg
gtctgggaggcatcgcgtgcatttgcgcaggagaccgtgacactgtccgtgctcgatggc
gcggacgtcatctatctggcctgtcacaacggtaaccggccgttgggcgtaacgttccgc
attggcatgcggctgccggctccctacacggcgacgggcaaggccatgctctcgacgctg
ccgccgggcgaggtcgccgatctgctgaccggcgcctggcctgcaccgcttacgcgtgcg
agtgtgagttcctactcggcattggccgacgagatggcgcaggtgcgtcgagacggctat
tcgatcgacaacggccagatgcgcgaaggcatgatctgcttcggtgcgccggtgttcgat
gccagcggcgagcgtgccgtggcagggctggcggtcagtttcctcacgaatgagatcgat
tcggaaaccggtcagcgcattggacgccagatgcgcgaactggccgatcagctctccgtg
cggctcggcgcgtcggcccgtcgctag
DBGET
integrated database retrieval system
