Pandoraea apista: SG18_06320
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Entry
SG18_06320 CDS
T03588
Name
(GenBank) hypothetical protein
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
papi
Pandoraea apista
Pathway
papi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SG18_06320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
papi03400
]
SG18_06320
Enzymes [BR:
papi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SG18_06320
DNA repair and recombination proteins [BR:
papi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SG18_06320
Prokaryotic type
SG18_06320
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AJE97891
LinkDB
All DBs
Position
3357960..3358955
Genome browser
AA seq
331 aa
AA seq
DB search
MTSRSRAGSPAKHDERQGSLFDDAAPAASTDNATVPEQAAPQATGTPEVPKAADAPPRRR
GRPPKSGASSTPVSGPVAAAATPGSGGDNAAGPLKGRVEDQFDALPHDWKTLVSPFVESA
AYAPLCRFVDAEVATGKTVYPADIFHALRMTSPKDVKVVILGQDPYHGDDHGIAQAHGLA
FSVQRGVRVPPSLRNIYKEIERDLGIPAPSHGNLDAWAKQGVLLLNTTLTVEAANAASHA
KPFKTGGWQACTDTLLSGLAAQQGPLVFLLWGSHAQAKAPLLAGHGHLLLEAPHPSPLSA
HRGFLGCGHFSAANAFLRQHGKTPIDWRVPN
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgacatcacgctcacgcgccggatccccggcgaaacacgacgaacggcagggctcgctg
ttcgacgacgctgcgccggccgccagcactgacaacgcaaccgtgccggagcaagccgct
ccccaggcgaccgggacgccggaggtacccaaggccgccgatgcgccgccgcgccgccgc
ggacgtccgccgaaatcgggggcatcgtcgaccccggtgtccgggccggtcgcggcggcg
gccacccccggctcgggcggcgacaacgccgcgggtccgctcaaaggccgtgtcgaagat
cagttcgacgcattaccgcacgactggaaaacgctagtctcaccgttcgtcgagagcgcg
gcttacgcaccgctgtgccgcttcgtcgacgccgaagtcgccaccggcaagaccgtctac
ccggcggacatcttccacgcgcttcgcatgacctcgcccaaggacgtcaaggtggtcatc
ctcgggcaagacccctatcacggcgacgatcacggtattgcgcaggcgcacggtctggcg
ttctcggtgcaacgcggcgtacgcgtgccgccatcgctgcgcaacatctacaaggaaatc
gaacgcgatctcggcatccccgcgccctcgcacggcaatctcgacgcctgggcgaaacaa
ggcgtgctgctcctgaacaccacgctgacggtggaagccgccaacgcagccagtcatgcg
aagccgttcaagaccgggggatggcaagcctgcaccgacaccttgctctcaggccttgcc
gcgcagcaggggccgctggtctttctgctgtggggaagccatgcgcaggccaaagcgccg
ctgctcgccggtcacggccatctgctgctcgaggcgcctcacccgtcgcccctctcggcg
catcgcggttttctcggctgcggccacttcagcgccgccaacgccttccttcggcaacac
ggcaagacgcccatcgactggcgcgtgccgaattga
DBGET
integrated database retrieval system
