Pandoraea apista: SG18_06325
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Entry
SG18_06325 CDS
T03588
Name
(GenBank) ligand-gated channel protein
KO
K16090
catecholate siderophore receptor
Organism
papi
Pandoraea apista
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
papi02000
]
SG18_06325
Transporters [BR:
papi02000
]
Other transporters
Pores ion channels [TC:
1
]
SG18_06325
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Ortholog
Paralog
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF8202
Motif
Other DBs
NCBI-ProteinID:
AJE97892
LinkDB
All DBs
Position
3359281..3361590
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AA seq
769 aa
AA seq
DB search
MSTAFQTRQRLLASACALVVAGSFSSLNAQAQTPQSTSAASPDSSASSASSASSASSANG
QTSAPAAAPAVALPTTQVNDSTVSSPMQTKTLPSYKFVAPLRDTPRSITVIPEELIKQTN
ATTFADALKTVPGITFIGGDAAANPSADRPVIRGFESRNSIFVDGMRDSGVQNRETFDIE
NISVIKGPDSVYAGRGAVGGSIDITTKTPRLEDFTNASLGLGTDSYKRLTMDVNRQVNDQ
TAVRLNVMGHDADQAGRNNVYSKRWGVAPSVAFGLNSPTTVTVSYYHLNSYDMPDFSAPF
RSAGGTPDGGFQRNQFYGLNNRDYRRGQTDTGEIKVEHRINDTWKIKNTTMVGRATLDYI
ATNPQFQSATSNIISLQAKSGKYATNSIANQTELTGKATLFGFEHTLTGGVEFSNEQSRY
EGYLVTDRAGNNIRSGGPCSVAYNCTTLGNWNPDNPWTGSIALNGDKSFPGAATNTRTNV
ASAYLFDSVKLSDRWLINAGARFDRFDVSAVQAGAPDLKNTSNLFSFQLGVIYKVLPSLS
LYASYGTSANPPGANSGLGGGTDQITATNNNLSPERSRNIEVGAKWDVIDQRLSLTAALF
QTDKTNARVSDGLGGTINAGSQRVRGAELGWAGSLTNHWRVFGGYSYLNAITTDAGPGAA
PGSNGLPMVMVPKHNLTLWTDYEVMPKFTVGAGMTLSSLTYASVSSTTRKWTPGYARFDA
MATYRVSRTVDLQLNVQNIFDKKYYASAYPIYATWAPGRTAMLTLNFHQ
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccgccttccagacgcgtcagcgtctgcttgcctcagcctgcgccctcgtggtc
gccggtagcttcagctccctgaacgcccaagcgcaaacgccgcagtcaacgtcggccgca
tcgcccgattcgtcagcttcgtcggcttcgtcggcttcgtcggcttcgtcggccaacggt
caaacgtctgccccggccgccgcgcctgcggtcgccctgccgacgacacaggtcaacgac
agcaccgtatcgtcgcccatgcagacaaagacgttgccgtcatacaagttcgtggccccg
ctgcgcgacacgccgcgctcgatcacagtcattccggaagaattgatcaagcagacgaac
gccacgactttcgccgacgcgctcaagaccgtgccgggcatcacgttcatcggtggcgat
gccgccgcgaacccgtcggcagaccgcccagtcattcgcggcttcgaatcgcgcaactcg
atcttcgtcgatggcatgcgcgactccggcgtacagaaccgcgagacgttcgacattgag
aacatcagcgtcatcaagggcccggattcggtctatgccggacgtggcgctgtcggtggc
agcattgacatcacgaccaagaccccgcgtctggaagacttcaccaacgcgagcctcggt
ctcggcaccgacagctacaagcgtctgacgatggacgtgaaccgtcaggtcaacgatcag
accgccgtgcgcctgaacgtgatgggccacgacgccgatcaggcgggtcgcaacaacgtc
tacagcaagcgctggggcgtggcaccgtcggtcgcctttggcctgaacagcccgaccacc
gtcacggtcagctactaccacctgaattcgtatgacatgccggacttcagcgcgccgttc
cgctcggcaggcggcacgccggacggcggtttccagcgcaatcagttctacggcctgaac
aaccgcgactatcgccgtggccagaccgacaccggcgaaatcaaggtcgagcaccgcatt
aacgacacgtggaagatcaagaacaccacgatggtcggccgcgccacgctcgattacatc
gccacgaatccgcagttccagtcggccacgtcgaacatcatttcgctgcaagccaagagc
gggaagtacgcgaccaacagcatcgccaaccagaccgaactcacgggcaaagccacgctg
ttcggcttcgagcacacgctcacgggcggcgtcgaattcagcaacgagcaaagccggtac
gagggttatctcgtcaccgatcgcgccggcaacaacattcgctcgggcggtccgtgctcg
gtggcgtacaactgcacgaccctcggtaactggaatccggacaacccctggaccggcagc
attgcgctcaacggcgacaagagcttccccggcgcggcgaccaacacgcgcaccaacgtg
gcgtcggcctacctgttcgacagcgtgaagctctcggatcgctggctcatcaacgcgggc
gcgcgattcgatcgtttcgacgtcagcgccgtgcaggcgggagcccctgatctgaaaaac
acctccaacctgttcagcttccagttgggggtgatctacaaggtgctgccgtcgctgagc
ctgtatgcgtcgtacggcacttcggccaacccgccgggcgcgaacagcggtctgggcggc
ggtaccgaccagatcaccgcgacgaacaacaacctttcgccggaacgcagccgcaacatc
gaagtcggtgcgaagtgggacgtgatcgatcaacgcctgtcgctgactgccgctttgttc
cagacagacaagacgaacgcgcgcgtctcggatggcctcggcggcacgatcaacgcgggc
agtcaacgcgtgcgcggcgccgaactcggctgggccggcagcctgacgaaccactggcgc
gtgttcggcggttactcgtatctgaacgcgatcacgacggacgcgggaccgggggcagcg
ccgggctcgaacggcctgccgatggtgatggtgccgaagcacaacctcacgctgtggacc
gattatgaagtgatgccaaaattcaccgtcggtgcgggcatgacactctcgagcctcact
tatgcatcggtgtcgtccaccacgcgcaagtggacaccgggttacgcacgcttcgacgcc
atggcaacgtatcgcgtgtcgcgcactgtcgatctgcaactgaacgtgcagaacatcttc
gacaaaaaatactacgcgagcgcttatccgatctacgcaacatgggcaccgggtcgcacc
gccatgctgacgctgaacttccatcagtaa
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