Pandoraea apista: SG18_06695
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Entry
SG18_06695 CDS
T03588
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
papi
Pandoraea apista
Pathway
papi03420
Nucleotide excision repair
papi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SG18_06695
03430 Mismatch repair
SG18_06695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
papi03400
]
SG18_06695
Enzymes [BR:
papi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SG18_06695
DNA repair and recombination proteins [BR:
papi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SG18_06695
MMR (mismatch excision repair)
Other MMR factors
SG18_06695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
DUF5710
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AJE97941
LinkDB
All DBs
Position
3442841..3444940
Genome browser
AA seq
699 aa
AA seq
DB search
MPNGPALTVEQIALQVSNERICIAMANAGTGKTTTLVARIGEAIAGGTPPEQILALTFTA
TAADVLRTRLQRSGIHADLHKRVRVSTFDDYSHDVLETLPTANERARRIQRDSFLTSYLI
EAMETLREDVEDRYAPGAFEDNHINVAQSLEAMRKLKAGGALFDDVDDEQLGDLLERLDV
TPAQYAITQAYERARLGALDEPKFRDRFDATYDLAQLIDRESIAPQYFAPCRLIVCDEQH
DFNEASYRVLRHLLRTLNCRFVGVGDRDQVIHGEMGASDVYMGERFRMDFSGASAYPLTR
TFRHGPHIAYPVAAFKRKTIESYVRRHTPVDVIKADGGHDGMANAVLADVRHWLQDSDKR
STCAVLLRDWHQSASIEEALWRAEIPFESPNKEGFQFREEIRFVRAVFALAMRAHETIDE
RERMSVAAVLGIFANIRLSRDQYQLTAKHPELIEQIYTSYLLGAVPGTPAATIGQLIREL
RASLPTLSASDAFRRIRQKIDFQAVATRLYARPYDVDLVERTLRAYASTLPADDTPLADY
FSSMMTRLSAVRRTRAGARVSVDTVANIKGKEFDHVVIPFLERNEFPNPFAPLESEKNLF
YVAMTRARESVSLITSSDETRQSGFIASLDLPRTVLLADDALVRNMAMPVDTTPARRYLS
GDTYGAKDELTARGAIYDPARRQWYITPEKDSAAFSPWL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacggtcccgcgctgaccgtggaacagatcgcccttcaggtctcgaacgagcga
atctgcatcgctatggccaacgcgggcaccggcaagacaacaacgctcgtcgcccggatc
ggcgaagccatcgccgggggtacgccacccgagcaaatcctcgccctcaccttcaccgcc
accgccgccgacgtgttgcgcacccgcctgcaacgctccggcattcacgccgatctgcac
aagcgggtgcgcgtctcgaccttcgacgactacagccatgatgtcctcgaaacgcttccc
acggcaaacgaacgcgcgcgccgcatccaacgcgacagtttcctcacgtcctacctcatc
gaggccatggagacattgcgcgaagacgtcgaggatcgctacgcgccgggcgctttcgag
gacaaccacatcaatgtggcgcaaagcctcgaagccatgcgaaagctcaaggcgggcggc
gcactgttcgacgacgtcgacgacgagcaacttggcgacctgctcgagcgtctggacgtc
acgccggcgcaatacgcgatcactcaggcctatgagcgggcccgactgggtgcgctggac
gaaccgaagttccgggatcgtttcgacgccacatacgatcttgcgcagttgatcgatcgc
gagagtatcgcgccacagtacttcgcaccatgccggttgatcgtatgcgacgagcagcac
gacttcaatgaagcatcgtatcgggtgctgcgtcatttgcttcgcacactgaattgccgt
ttcgtcggcgtgggcgatcgcgatcaggtcattcacggggagatgggggcgagcgacgtg
tatatgggcgaacgctttcgcatggacttctccggcgcgagcgcctatccgctcacacgt
acctttcgtcatggcccgcatatcgcttacccggttgctgcgttcaagcgcaaaaccatc
gagtcgtatgtcaggcgccacacgcctgtcgacgtcatcaaggctgacggcgggcacgac
gggatggcaaacgcggtactggcagacgtgcgtcactggctgcaagacagcgacaagcgc
tcgacgtgtgccgtgcttctgcgcgactggcatcagagcgcatcgatagaagaggcgttg
tggcgtgccgagattccattcgaatcgccgaacaaagagggctttcagttccgcgaagag
attcgtttcgtgcgcgcggtgttcgcgttggcaatgcgcgcacatgaaaccatcgatgag
cgcgaacgcatgtccgttgccgcggtgctcggcatcttcgcgaacattcgtctgtcacgt
gaccagtatcagttgacggcaaagcatccggaactgatcgaacagatctacacgtcgtat
ctgctgggggctgtgccgggcacacctgccgcgaccatcggccagttgattcgcgagttg
cgcgcgagcctgccaacgctctcggcaagcgacgccttccgccgtattcgtcagaagatc
gattttcaggcggtggccacgcgcctgtacgcgcggccgtacgacgtcgatcttgtcgag
cgcacactgcgcgcctacgcgtcgacactgcccgccgacgacaccccccttgccgattac
ttttcatcgatgatgacgcgtctttccgccgtccgccgcacgcgagcgggtgcgcgtgtg
agcgtagacaccgtcgcgaacatcaaaggcaaggagttcgatcacgtcgtcatccctttc
ctggagcgcaacgagtttccgaatcctttcgcgccactggaaagcgaaaagaatctgttc
tacgtggcgatgacccgggcacgagaatcggtatcgctgatcacgtcgagcgacgagacc
cggcaaagcggcttcattgcttcgctcgacttgccgcgcaccgtgcttctcgccgacgac
gcgctcgtgcgcaatatggcgatgcccgtggacaccacacccgcccgccgctacctgagc
ggcgacacctatggggcgaaggacgaactgacggcgcgcggggcgatctacgatccggcg
cggcggcagtggtacatcacgccggagaaggactcggcggccttctcgccatggctgtag
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