Pandoraea apista: SG18_07420
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Entry
SG18_07420 CDS
T03588
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
papi
Pandoraea apista
Pathway
papi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SG18_07420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
papi03021
]
SG18_07420
03400 DNA repair and recombination proteins [BR:
papi03400
]
SG18_07420
Enzymes [BR:
papi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SG18_07420
Transcription machinery [BR:
papi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SG18_07420
DNA repair and recombination proteins [BR:
papi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SG18_07420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Biotin_lipoyl_2
ApbA_C
Baculo_ME53
Motif
Other DBs
NCBI-ProteinID:
AJE98061
UniProt:
A0A0B5FB84
LinkDB
All DBs
Position
complement(3585972..3590183)
Genome browser
AA seq
1403 aa
AA seq
DB search
MKALLDLFKQVQQDEQFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAYVVLEPGMTPLKRCQIMTEEDYYNKVEEYGDEFRAEM
GAEGVRELLRSIDIDQQVEHLRAELQATGSEAKIKKYAKRLKVLEAFQRSGIKPEWMVLE
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPDIIVRNEKRMLQ
ESVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITVGPT
LKLHQCGLPKLMALELFKPFIFHKLEVMGVATTIKAAKKEVENQTAVVWDILEEVIREHP
IMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLFPANGDPSIVPSQDIVLGLYYATRDKINGRGEGLSFIDVSEVLRAYDNK
EVELASRVNVRITEYTVDPETGEKTPKITLYPTTVGRAILSEILPPGLPFSVLNKSLKKK
EISKLINTAFRRCGLRETVIFVDKLMQSGFRLATRAGISICVDDMLVPTKKEELIGEASK
KVKEYDRQYMSGLVTAQERYNNVVDIWGATGDAVGKAMMEQLSKEKTIDRDGNSVDQESF
NSIYMMADSGARGSSAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTTNGVAMKALVEGGEVVEALRDRI
LGRVAVADVVNPETQETVYEAGTLLDEDAVEMIETLGIDEVRVRTPLTCDTRYGLCAACY
GRDLGRGSRVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSIEAKSNGTVR
FTATMRYVTNGRGEQIAISRSGEILITDDHGRERERHKVPYGATLLQLDGAQVKAGAQLG
TWDPLTRPIITEHGGIAKFENVEEGVTVAKQIDDVTGLSTLVVIDPKRRGPASKNVRPQV
KLLDENGQEVKIPGTDHAVTIGFQVGALITVKDGQHVPVGEVLARIPTESQKTRDITGGL
PRVAELFEARAPKDAGILAEVTGTTSFGKDTKGKQRLVITDLDGNQHEFLIPKEKQVLVH
DGQVVNKGEMIVDGPADPHDILRLQGIEALARYIVDEVQDVYRLQGVKINDKHIEVIVRQ
MLRRVQIVDSGDTRFITGEQVERSDMLDENDAMNAQDKRPAQYENVLLGITKASLSTDSF
ISAASFQETTRVLTEAAIMGKKDDLRGLKENVIVGRLIPAGTGLAYHKARKARETSDRER
HDQIALEEAFAPMPSSVEEPTAE
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctttgctcgatctattcaagcaagtccagcaggacgaacagttcgacgcgatc
aagatcggtctggcttcgccggacaagatccgttcgtggtcgttcggcgaagtgaagaag
ccggaaacgatcaactaccggactttcaagcccgagcgtgacggtctgttctgcgcaaag
atcttcggtccgatcaaggactacgaatgcctttgcggcaagtacaagcgcctgaagcac
cgtggcgtgatctgcgagaagtgcggcgtggaagtcacgctggcgaaggtgcgtcgcgaa
cgcatgggccacattgagctggcctcgccggtcgcgcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcatggtgctcgacatgacgctgcgcgacatcgaacgcgtgctgtac
ttcgaagcctatgtggtcctcgaacctggcatgacgccgctcaagcgttgccagatcatg
acggaagaggattactacaacaaggtcgaggaatacggcgacgaattccgtgccgaaatg
ggtgcggaaggcgtgcgcgaactgctgcgctcgatcgacatcgaccagcaggtcgagcat
ctgcgcgccgagctgcaagccacgggctcggaagccaagatcaagaagtacgccaagcgc
ctgaaggtgctcgaggctttccaacgctcgggcatcaagcccgagtggatggtgctcgaa
gtgctgccggtgctcccgcctgagctgcgcccgctggtgccgctcgacggtggccgcttc
gcgacctcggacctgaacgatctgtatcgccgcgttatcaaccgtaacaaccgtctgaag
cgtctgctcgagctgaaggccccggacatcatcgtgcgcaacgaaaagcgcatgctgcaa
gagtccgtggactcgctgctcgacaacggccgtcgcggtaaggcgatgaccggtgcgaac
aagcgtccgctcaagtcgctggccgacatgatcaagggtaagagcggtcgtttccgtcag
aacctgctgggtaagcgcgttgactactcgggccgttcggtgattaccgtgggcccgacg
ctcaagctgcatcagtgcggtctgccgaagctgatggcgctcgaactcttcaagccgttc
atcttccacaagctggaagtgatgggcgtggcgacgaccatcaaggccgcgaagaaggaa
gtcgagaaccagacggcggtggtgtgggacatcctcgaagaggtgatccgcgagcacccg
atcatgctgaaccgcgcgccgacgctgcaccgtctgggtatccaggcgtttgagccggtg
ctgatcgaaggcaaggcaattcagcttcacccgctggtttgcgcggcgttcaacgccgac
ttcgacggtgaccagatggccgttcacgtgccgctgtcgctcgaagcgcagatggaagcg
cgtaccctgatgctggcctcgaacaacgtgttgttcccggctaacggcgatccgtcgatc
gtgccgtcgcaggatatcgtgctgggtctgtactacgcgacgcgtgacaagatcaacggc
cgtggcgaaggcctgtcgttcatcgacgtctcggaagtgctgcgtgcgtacgacaacaag
gaagtcgaactggcttcgcgtgtgaacgtgcgtatcacggagtacacggtcgatccggaa
acgggcgaaaagacgccgaagatcacgctgtacccgacgactgtcggccgcgcgatcctg
tcggaaattctgccgccgggcctgccgttctcggtcctgaacaagtcgctcaagaagaag
gaaatctcgaagctgatcaacacggcgttccgccgctgcggtctgcgcgagacggtgatc
ttcgtcgacaagctgatgcagtcgggcttccgcctggcaacgcgtgccggtatctcgatc
tgtgtcgacgacatgctcgtgccgacgaagaaggaagagctgatcggcgaagcgtcgaag
aaggtcaaggaatacgaccgtcagtacatgtcgggtctggtcacggcgcaagagcgttac
aacaacgtcgtggacatttggggtgctaccggtgacgccgtgggtaaggcgatgatggag
cagctctcgaaggaaaagacgatcgatcgcgacggcaactccgtggatcaggagtcgttc
aactcgatttacatgatggccgactccggtgctcgcggttcgagcgcccagattcgccag
ctcgccggtatgcgtggcctgatggccaagccggacggctcgattatcgagacgccgatt
accgcgaacttccgcgaaggcctgaacgtgttgcagtacttcatctcgacccacggtgca
cgtaagggtctggccgatacggcactgaagacggcaaactcgggttacctgacgcgtcgt
ctggttgacgtgacgcaggatctggtcgtggtcgaagacgattgcggcacgaccaacggc
gtggcgatgaaggcgctggtcgagggcggtgaagtggtcgaagccctgcgtgaccgtatt
ctgggtcgcgtggcagtggctgacgtcgtgaatccggaaacgcaggaaacggtgtacgaa
gcgggcacgctgctggacgaagacgccgtcgaaatgatcgaaacgctgggtatcgacgaa
gtgcgcgtgcgcacgccgttgacctgcgatacgcgctacggtctgtgcgcagcctgctat
ggccgcgatctgggtcgtggttcgcgcgtgaacgtcggcgaagccgtcggcgtgatcgca
gcgcagtcgatcggcgaaccgggcacgcagctcacgatgcgtacgttccacatcggtggt
gcggcgtcgcgtgcggcagtggcctcgtcgattgaagccaagtcgaacggtacggttcgc
ttcacggcgaccatgcgttacgtgacgaatggccgtggcgagcagatcgcgatctcgcgt
tcgggcgaaatcctgatcacggacgatcatggccgtgagcgcgagcgtcacaaggtgccg
tacggcgccacgctgctgcaactggacggtgcacaggtcaaggccggtgcccaactgggt
acgtgggatccgctgacgcgcccgatcattaccgaacacggcggtatcgccaagttcgag
aacgtcgaggaaggggtcacggttgccaagcagatcgacgatgtgacgggtctgtccacg
ctggtcgtgatcgatccgaagcgtcgtggtccggcgtcgaagaacgtgcgtccgcaggtc
aagctgctcgacgaaaacggtcaggaagtgaagatcccgggtaccgatcacgctgtgacg
atcggcttccaggtcggcgcactgattaccgtcaaggacggtcagcatgtgccggtgggt
gaagtgcttgcacgtatcccgaccgaatcgcagaagacccgcgacattaccgggggtctg
ccgcgtgtggccgaactgttcgaagcgcgtgcaccgaaggacgccggcattctggccgaa
gtcacgggcaccacgtcgttcggtaaggacacgaagggcaagcagcgtctggtcattacc
gatctggacggcaaccagcacgaattcctgattccgaaggaaaagcaggtgctggtgcac
gacggtcaggtggtgaacaagggcgaaatgatcgtggacggcccggccgacccgcacgac
atcctgcgtttgcagggtatcgaagcgctggcgcgttacatcgtcgacgaagttcaggac
gtgtaccgcttgcagggtgtgaagatcaacgacaagcacatcgaggtgatcgttcgccag
atgctgcgtcgtgtgcagatcgtcgattcgggcgatacgcgcttcatcaccggcgaacag
gtcgaacgttcggacatgctcgacgagaacgacgccatgaacgcgcaagacaagcgtccg
gcgcagtacgagaacgtgttgctgggtattacgaaggcgtcgctctcgacggattcgttc
atctcggccgcatcgttccaggaaacgacgcgcgtgttgaccgaagccgccatcatgggc
aagaaggacgacctgcgtggcctgaaggaaaacgtcatcgtcggccgtctgatcccggca
ggtacgggtctggcgtatcacaaggctcgcaaggcccgcgagacgtcggatcgcgagcgt
cacgaccagatcgctctggaagaggcgtttgctccgatgccgagttcggtggaagagccc
acggcagagtaa
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integrated database retrieval system
