KEGG   Pandoraea apista: SG18_08390
Entry
SG18_08390        CDS       T03588                                 
Name
(GenBank) RNA polymerase sigma70
  KO
K02405  RNA polymerase sigma factor FliA
Organism
papi  Pandoraea apista
Pathway
papi02020  Two-component system
papi02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:papi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SG18_08390
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    SG18_08390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:papi03021]
    SG18_08390
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:papi02035]
    SG18_08390
Transcription machinery [BR:papi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SG18_08390
Bacterial motility proteins [BR:papi02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    SG18_08390
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 UPF0122 GerE
Other DBs
NCBI-ProteinID: AJE98191
UniProt: A0A0B5FBM5
LinkDB
Position
complement(3803042..3803770)
AA seq 242 aa
MYTARGKVDTNDTLTQYAPLVRRLALQLMAKLPASVELEDLIQAGMLGLLDASNRYQETQ
GAQFETYASQRIRGAMLDELRELDWASRGIRKTARQIEQAVQRLEQRLGRGPSESEIAGE
MSIGLSEYQQMLQDVHGCQLIYYEDFEAADEEPFIDRICSDPGADPLTMLLDEGLRSGVV
DAIEHLPEREKLLMSLYYEQGLNLREIGAVLEVSESRVCQLHSQAISRLRATLREKAWTS
AN
NT seq 729 nt   +upstreamnt  +downstreamnt
atgtataccgcgcgcgggaaggtcgacacgaacgacacgctgacccaatacgcgccattg
gtgcgccgtctggcgctgcaattgatggcgaagctgccggcgagcgtggaattggaagac
ctgattcaggcgggcatgctggggttgctcgatgcgtcgaaccggtatcaggagacgcag
ggtgcacagttcgaaacgtacgcgagccagcgcattcgcggggcaatgctcgacgagttg
cgcgagctggattgggcgtcgcgcggcattcgcaagacggcgcgtcagatcgaacaggcg
gtgcagcggctggagcaacggctgggccgggggccgtcagagagcgagattgccggcgag
atgtcgatcggtctgtccgagtatcagcagatgttgcaggacgtgcatggctgccagttg
atttattacgaagatttcgaagccgcggacgaagagcctttcatcgaccggatctgttca
gacccgggcgccgatccgttgacgatgctgctcgacgaggggctgcgcagcggcgtggtc
gatgccatcgagcacttgcccgagcgcgagaagctgctgatgagtttgtactatgagcag
gggctgaaccttcgcgagattggtgcagtgctcgaagtcagcgagtctcgcgtttgccag
ttgcacagccaggcaatctcccgcctgcgcgcgacactgcgtgaaaaggcgtggacgtcg
gcgaactga

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