Pandoraea apista: SG18_08970
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Entry
SG18_08970 CDS
T03588
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
papi
Pandoraea apista
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
papi03032
]
SG18_08970 (gyrB)
03400 DNA repair and recombination proteins [BR:
papi03400
]
SG18_08970 (gyrB)
Enzymes [BR:
papi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SG18_08970 (gyrB)
DNA replication proteins [BR:
papi03032
]
Prokaryotic type
DNA Topoisomerases
SG18_08970 (gyrB)
DNA repair and recombination proteins [BR:
papi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SG18_08970 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AJE98283
LinkDB
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Position
3978464..3980941
Genome browser
AA seq
825 aa
AA seq
DB search
MSEQQKQADSGYGAASIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEALA
GYCDDIHVIIHADNSISVTDNGRGIPTGIKFDDKHEPKRSAAEIVMTELHAGGKFDQNSY
KVSGGLHGVGVSCVNALSTYLKLTVRRDGKKHFMEFHRGVPQNRELEIVDGVETSPLKLL
GDTDKRGTEVHFLADETIFGKVEFHYDILAKRMRELSFLNNGVRIRLTDQRTGKEDDFAF
GGGVKGFVEYINKSKSVLHPTIFHVTGERDGIGVEVAMQWNDSYNETVLCFTNNIPQRDG
GSHLTGLRTAMTRIINKYIDENELAKKAKVETTGDDMREGLTCVLSVKVPEPKFSSQTKD
KLVSSEVRAPVEEYVAKALEEFLQETPNDAKIICGKIVEAARARDAARKAREMTRRKGVL
DGVGLPGKLADCQEKDPALCEIYVVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKARF
DKLISSEQIVTLITALGCGIGKDDYNIDKLRYHRIIIMTDADVDGAHIRTLLLTFLYRQV
PELIERGYVYIAQPPLYKIKHNKDERYIKDESELGQYMLKLALNNAELTPTTDAAPISGD
ALGELTRSYQLSDGVIERLSRIYESSVLTAVTEGVEINLDTEASAQASAKALEAALSNDP
LAPEITITAVMEDVENAEPVPSLRVERRHHGNVKVTVIDQDFLQTADYAQLQKTAETFKG
LIGEGATIKRGERSQTVTNFKSAMKWLMADAESKVSKQRYKGLGEMNAEQLWETTMDPTM
RRLLRVQIEDAIAADGIFTTLMGDDVEPRRAFIESNALRAGNIDV
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacagcaaaagcaggccgatagcggctatggtgcagcctccatccagatcctc
gaaggtctggaggctgtgcgcaagcgtcccggcatgtacattggcgacacgtcggacggc
acgggcctgcatcacctggtattcgaggtgctggacaactcgatcgacgaagcgcttgcg
ggttactgcgatgacatccacgtgatcattcacgcggacaattccatttccgtgacggac
aacggtcgcggcattcccacgggcatcaaattcgacgacaagcacgagccgaagcgtagc
gctgcggaaatcgtgatgaccgagttgcacgcgggcggcaagttcgaccagaacagctac
aaggtgtccggcggtctgcacggcgtgggcgtgtcgtgcgtgaacgcgctctccacgtac
ctgaagctgaccgtgcgccgtgacggcaagaagcacttcatggaattccaccgtggcgtg
ccgcagaaccgcgagctggaaatcgtggacggggtcgagacgtcgccgctgaagctgctg
ggcgataccgacaagcgtggtaccgaagtgcacttcctggccgacgaaacgatcttcggc
aaggtcgaattccactacgacattctcgccaagcgcatgcgcgagctgtccttcctgaac
aacggtgttcggattcgtctgacggatcaacgcacgggcaaggaagacgatttcgcattc
ggcggcggcgtgaagggctttgttgaatacatcaacaagtcgaagtcggtgctgcacccg
acaatcttccacgtcacgggcgagcgcgacggtatcggcgtggaagtcgccatgcagtgg
aacgacagctacaacgaaacggtgctgtgtttcacgaacaacattccgcagcgtgacggt
ggctcgcacttgaccgggctgcgtacggcgatgacccgcatcatcaacaagtacatcgac
gagaacgaactggcgaagaaggccaaggtcgagaccactggcgacgacatgcgcgaaggt
cttacgtgcgtgttgtcggtgaaggtgccggagccgaagttctcgtcgcagacgaaggac
aagctggtgtcgtcggaagtgcgtgcgccggtggaagaatacgtggcgaaggcgctggaa
gagtttttgcaggaaacgccgaacgacgcgaagatcatctgcggcaagatcgtggaggcg
gcgcgtgcgcgcgacgcggcgcgtaaggcgcgtgaaatgacgcgtcgtaagggcgtgctc
gatggcgttggcctgccgggcaagctggcggattgccaggagaaggacccggcgctgtgc
gagatctacgtggtcgagggcgactcggcaggcggttcggcgaagcagggtcgcgaccgt
aagttccaggcgattttgccgctgcgcggcaaggtgctgaacgttgagaaggcgcgtttc
gacaagctgatttcgagcgagcagatcgtgacgctgattaccgcgctgggttgcggtatc
ggcaaggacgactacaacatcgacaagctgcgttatcaccgcatcatcatcatgaccgat
gctgacgtggacggcgcgcacatccgtacgctgttgctgacgttcctgtatcgtcaggtg
ccggagctgatcgagcgtggctacgtgtacatcgcgcaaccgccgctgtacaagatcaag
cacaacaaggacgagcgatacatcaaggacgagagtgagctggggcagtacatgctgaag
cttgcgctgaacaatgccgagctgacgccgacgaccgatgccgcgccgatttcgggcgat
gcattgggcgagctgacgcgcagctaccagttgtccgatggcgtgatcgagcgtctgagc
cgcatttacgagtcgtcggtactgacggcggtgaccgaaggcgtcgagatcaatctcgac
accgaggcgtcggcccaggcgtcggccaaggcgcttgaagcggcactgagcaacgatccg
cttgcgccggagatcacgatcacggcggtgatggaagacgtcgagaatgccgaaccggtg
ccgtcgttgcgtgtggagcgtcgccaccacggcaacgtgaaagtgacggtgatcgatcag
gactttttgcaaacggcggactatgcgcagttgcagaagacggccgagacgttcaagggt
ctgattggcgaaggcgccacgatcaagcgtggcgagcgttcgcagacggtgacgaacttc
aagtcggcgatgaagtggctgatggccgatgcggagagcaaggtctcgaagcagcgctac
aagggtctgggcgaaatgaacgcggaacagttgtgggagaccacgatggacccgacaatg
cgccgcctgttgcgtgtgcagatcgaagacgcgattgcggcagacggcatcttcaccacg
ctgatgggtgacgacgtggaaccgcgccgcgcattcatcgagtcgaacgcactgcgtgca
gggaatatcgacgtttga
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