Pandoraea apista: SG18_09360
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Entry
SG18_09360 CDS
T03588
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
papi
Pandoraea apista
Pathway
papi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SG18_09360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
papi03021
]
SG18_09360
Transcription machinery [BR:
papi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SG18_09360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_24
Sigma70_ECF
HTH_40
HTH_23
HTH_AsnC-type
HTH_IclR
HTH_Crp_2
HTH_28
Crp
LacI
GerE
Motif
Other DBs
NCBI-ProteinID:
AJF00880
LinkDB
All DBs
Position
complement(4077274..4077807)
Genome browser
AA seq
177 aa
AA seq
DB search
MRDDTGGRKNDARADASGVATLYHDHHGWLRNWLQRKLGNHGDAADLAHDTFVRLLSKDT
LVCPREPRAFLTVVAQGLVANLHRRRKIEAAYLDALAAQPEAVAPDPETRAILLQTLIDI
DRRLDGLPPVVRRVFLMSQLDGLAQRDIAEAVGLSIATVQRHIVKALHACCFGNPAA
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacgacaccgggggacgcaaaaacgacgcacgcgccgacgcgtccggcgtggct
acgctctatcacgatcaccacggctggctgcgcaactggttacaacggaagctcggcaat
cacggcgacgctgccgatctcgcgcacgacaccttcgtgcgactgctcagcaaggacacc
ctcgtctgtccgcgcgagccccgggcgtttctcaccgtcgtggcgcaaggattggtcgcc
aatctgcatcgccgtcgcaagatcgaagcggcgtatctcgatgccctcgcggcacaaccc
gaggccgtcgcgcccgatccggaaacgcgcgcaatcctgctccagacactcatcgacatc
gaccggcgcctcgacggcttgccgcccgttgtccggcgcgtcttcctgatgtcgcaactc
gacggccttgcgcagcgcgatatcgccgaggccgtcggcctttccatcgccaccgtgcag
cgtcacatcgtcaaggcgctgcacgcctgttgtttcgggaatcccgccgcatga
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integrated database retrieval system