Pandoraea apista: SG18_11490
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Entry
SG18_11490 CDS
T03588
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
papi
Pandoraea apista
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
papi03021
]
SG18_11490
Transcription machinery [BR:
papi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SG18_11490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AJE98653
UniProt:
A0A5E5NZV5
LinkDB
All DBs
Position
complement(4540612..4541550)
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AA seq
312 aa
AA seq
DB search
MSTAATLHPTTPATGTAPNSRALALAPSALMLPGSLGNIDSYIQAVHRIPMLTAEEEQSL
AKRLRENDDLEAARQLVLSHLRLVVSIARNYLGYGLPHADLIQEGNIGLMKAVKRFDPTQ
GVRLVSYAMHWIKAEIHEYVLRNWRTVKVATTKAQRKLFFNLRSQKQGLQAFTPEEIDQV
ARDLNVKREDVIEMETRMSGGDIALEGHSDDSDSASFAPIAYLADSHQEPTAVIAARERD
HLQSDGLQTALARLDSRSRRIIEARWLSVADDGSGGATLHELADEFGVSAERIRQIEVAA
MKKMKGALQAFA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
ttgagtactgccgccactttgcatccgacgacgccggccaccggcacggcgccgaattct
cgtgcccttgctctcgccccgtcggcattgatgctgccgggcagtctgggcaatatcgac
agctatattcaggctgtccatcgcattccgatgctcaccgccgaggaagagcagtcgctc
gccaagcgcctgcgtgaaaacgacgacctcgaagctgcccgtcagctcgtgctctcgcac
ctgcgactggtggtctcgatcgcgcgtaactacctcggctatggtctgccgcacgccgac
ctgattcaggaaggcaacatcggcctgatgaaggccgtgaagcgcttcgatccgacccag
ggtgtacgactcgtatcgtatgccatgcattggatcaaggccgagattcacgaatacgtg
ctgcgcaactggcgcacggtcaaggtcgccacgaccaaggcccagcgcaagctgttcttc
aacctgcgcagccagaagcaaggcctgcaagcgttcacgccggaagagatcgatcaggtc
gcacgcgatctgaacgtgaagcgcgaagatgtcatcgagatggaaacgcgcatgtcgggc
ggcgatatcgcccttgagggtcacagcgacgatagcgacagcgcaagcttcgctcccatc
gcgtacctcgccgactcgcaccaggagccgaccgccgtgattgccgcgcgcgagcgcgac
catctgcaaagcgacggtctgcaaacggcgctcgcccgcctcgactcgcgcagccgccgc
attatcgaagcgcgctggttgtcggtcgccgacgatggcagcggcggcgccacgctgcac
gaactggcagacgaattcggcgtgtccgccgagcgcatccgtcagatcgaagtcgccgcc
atgaagaagatgaaaggcgcgctgcaagctttcgcgtaa
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