Pandoraea apista: SG18_14315
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Entry
SG18_14315 CDS
T03588
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
papi
Pandoraea apista
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
papi03000
]
SG18_14315
Transcription factors [BR:
papi03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SG18_14315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
HTH_30
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AJE99066
LinkDB
All DBs
Position
complement(5139044..5139952)
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AA seq
302 aa
AA seq
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MTPDQLLTFATVAELGNISHAAQALHLSQPAVSGQLRLLQESFGEPLYRRDGRGIRLTAV
GEQVAVYANKLRQDYRQALALRDSLRGMETGALRIGASTTPASYLLPYVIAEFHQRYPAV
ALHIVDGNTSEIVAQLDRLDVAFIEGAVPPGLSPEIAVRPWRDDEVVAIARVDHPLTKAP
EGASLQAIADYPLIMREPGSGVRALVARAFSVAGLTPRVALELAGVESIKEAVRAGMGVG
FVSAMSMRHEDAALVSVRIDPPHGLKRLLTALVPHADALSRPTERFLAQCFAGDAADPAA
VR
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgacgccggaccaattgctgaccttcgcgacggtcgccgaactgggcaatatcagccac
gcggcacaggcgctgcatctgtcgcaacctgcggtttccggacaactccgtttgttgcag
gaatcgtttggcgagccgttgtaccggcgcgacggacgcggcattcgcctcacggccgtg
ggcgagcaggtcgcggtgtacgcgaacaaactgcggcaggattaccgtcaggcactcgcc
ctgcgcgacagcctgcgcggcatggaaaccggcgcgctgcgcattggcgcgagcacaacg
ccggccagctatctcctgccctacgtgatcgcggaattccatcagcgctaccccgctgtc
gccttgcatatcgtcgacggcaacaccagcgaaatcgtggcgcagctcgaccgtctggac
gttgccttcatcgagggggccgtgccgccgggcttgtcgccggagatcgccgtgcggccg
tggcgcgacgacgaagtcgtggcgattgcgcgtgtcgaccatccgctgacgaaagccccg
gaaggggcgtcgttgcaggccatcgccgactacccgttgatcatgcgcgaaccgggctcg
ggggtacgagcgctggtcgccagagcgttctcggtggcggggctcacgccgcgcgtggcg
ctggaactggcgggggtcgagagtatcaaggaagccgtgcgtgccggcatgggcgtgggc
ttcgtctcggcgatgtcgatgcgtcatgaagacgctgcgctcgtttcggtgcgcatcgat
ccgccgcacggtctcaagcgtttgttgactgcgctcgtcccccacgccgacgccctctcg
cgccccacagagcgctttctcgcccagtgctttgcgggagacgccgccgatccggctgcg
gtgcggtga
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