KEGG   Pandoraea apista: SG18_16425
Entry
SG18_16425        CDS       T03588                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
papi  Pandoraea apista
Pathway
papi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:papi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SG18_16425
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:papi03400]
    SG18_16425
DNA repair and recombination proteins [BR:papi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SG18_16425
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SG18_16425
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C UVR ResIII DEAD AAA_30 FlaG AAA_22 AAA_16 AAA_11 UB2H Kinesin DUF2851 HH_RND_rel PIK3R4-like_middle
Other DBs
NCBI-ProteinID: AJE99388
UniProt: A0ABX9ZHP6
LinkDB
Position
280528..282615
AA seq 695 aa
MTPAAEHVLDESKFLTFPDSPYQLYCPFPAAGDQPAAIAQLTEGVEDGLAFQTLLGVTGS
GKTFTMANVIARLGRPAIVFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAYVP
QRDLFIEKDSSVNEHIEQMRLSATKSLLERRDVVIVATVSAIYGIGNPNEYHQMILTLRQ
GDKMGQRDIIARLIAMQYSRNETDFGRGTFRVRGDTIDIFPAEHAELALRVELFDDEVDT
LQLFDPLTGRVRQKVPRFTVYPSSHYVTPRDTVLRAIETIKDELRDRLDFFYKEGKLVEA
QRLEQRTRFDLEMLQELGFCKGIENYSRHLSGAAPGEPPPTLVDYLPPDALMFLDESHVL
IGQFNGMYNGDRARKENLVNYGFRLPSALDNRPLKFAEYERKMRQAIFVSATPADYEAKR
TGQVVEQVVRPTGLIDPVIDVRPARTQVDDVLSEINKRVAVGERVLVTTLTKRMAEQLTD
YLSDNGVKVRYLHSDIDTVERVEIIRDLRLGAFDVLVGINLLREGLDIPEVSLVAILDAD
KEGFLRSERSLIQTIGRAARNVNGTAILYGDKMTDSMARAIGETERRRAKQMAHNEAHGI
VPQGVKKRIKDIIDGVYDPQDAKAELAEAKEQAHYQDMSEKQLAREIKKLEKQMQEHARN
LEFEKAAKVRDQLLHVKALVFGTDGASEAELGPKL
NT seq 2088 nt   +upstreamnt  +downstreamnt
atgacccctgcggctgaacacgtcctggacgaaagcaagttcctgacgttcccggattcg
ccttaccagctctactgcccattccctgccgccggcgaccagcccgccgccattgcgcag
ttgaccgagggggtggaagacgggcttgcgttccagaccttgctcggcgtaaccgggtcg
ggcaagacgttcacgatggcaaatgtcatcgcgcggcttggccgcccggccattgtcttc
gcccccaacaagacgctcgccgcccagctctattcggagttccgcgaattcttcccgcgt
aatgcggtggagtacttcgtgtcgtactacgactattaccagccggaagcgtatgtgccg
cagcgcgatctgttcatcgagaaggattcgtccgtcaacgaacacatcgagcagatgcgc
ctctcggcaacgaagagcctgctcgaacgccgcgacgtggtgatcgtcgccaccgtctcc
gccatctacggtatcggtaatccgaacgaataccaccagatgattctgacgttgcgccag
ggcgacaagatggggcagcgcgatatcatcgcgcgcctgatcgcgatgcaatacagccgt
aacgagacggattttggacgaggtaccttccgcgttcgcggcgacaccatcgatatcttc
ccggcagagcacgccgaactcgcgttgcgcgtggagttgttcgacgacgaagtcgacacg
ctgcaactcttcgatccgctcacggggcgcgtgcgtcagaaggtgccgcgatttacggtg
tatccgtcctcacattacgtaaccccgcgagatacggtgttgcgcgccatcgagacgatc
aaggacgaattgcgcgaccggctcgatttcttctacaaagaaggcaagctggtcgaggcg
cagcgtctggagcagcgcacccgattcgatctggaaatgttgcaggagctgggcttctgc
aagggcatcgagaactactcgcggcatttgtccggcgcagcgccgggagagccgccgcct
accctcgtcgactatctgccgcccgacgcgctaatgttcctcgacgagtcgcacgtgctg
atcggtcagttcaacggcatgtacaacggcgaccgggcgcgcaaggaaaaccttgtgaac
tacggcttccgtctgccgtcggctttggataaccggccgctcaagttcgccgagtacgaa
cgcaagatgcgtcaggcaatcttcgtctctgccacccctgcggattacgaggcgaagcgt
acggggcaggtggtggaacaggtggtgcggccgaccgggctgatcgacccggtcatcgac
gttcgcccggcacgtacgcaagtagacgacgtgctctcggaaatcaacaaacgtgtggcg
gtgggagagcgtgtgcttgtcaccacgctcacgaagcgcatggcggagcagctcaccgac
tatttgtccgataacggtgtgaaggtccgctatctgcacagcgatatcgataccgtagaa
cgcgtagaaatcatccgcgatttgcgcttgggcgcattcgacgtactcgtcgggatcaac
ttgctgcgtgaggggttggatattccggaagtgtcgcttgtggcaattctcgacgcggac
aaggaaggtttcctgcgttccgagcggtcattgattcagacgatcgggcgggcggcgcgt
aacgtcaacgggacggccattctctacggcgacaagatgacagactcgatggcgcgcgcg
atcggcgaaacggaacgtcgccgcgcgaagcagatggcgcataacgaggcgcatggcatt
gttccgcaaggggtcaagaagcgcatcaaggacatcatcgacggggtctacgatccgcag
gacgccaaggcggaactggctgaagcgaaggagcaggcgcactaccaggacatgtcggaa
aagcaactggcgcgcgagatcaagaagctcgagaagcagatgcaagagcatgcgcgcaat
ctggagttcgagaaagctgcgaaggtgcgcgaccagttgctgcatgtcaaggcgctggtg
ttcggcaccgatggcgcgagcgaggcggaactggggccgaaactctga

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