Pandoraea apista: SG18_16425
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Entry
SG18_16425 CDS
T03588
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
papi
Pandoraea apista
Pathway
papi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SG18_16425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
papi03400
]
SG18_16425
DNA repair and recombination proteins [BR:
papi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SG18_16425
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SG18_16425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
FlaG
AAA_22
AAA_16
AAA_11
UB2H
Kinesin
DUF2851
HH_RND_rel
PIK3R4-like_middle
Motif
Other DBs
NCBI-ProteinID:
AJE99388
UniProt:
A0ABX9ZHP6
LinkDB
All DBs
Position
280528..282615
Genome browser
AA seq
695 aa
AA seq
DB search
MTPAAEHVLDESKFLTFPDSPYQLYCPFPAAGDQPAAIAQLTEGVEDGLAFQTLLGVTGS
GKTFTMANVIARLGRPAIVFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAYVP
QRDLFIEKDSSVNEHIEQMRLSATKSLLERRDVVIVATVSAIYGIGNPNEYHQMILTLRQ
GDKMGQRDIIARLIAMQYSRNETDFGRGTFRVRGDTIDIFPAEHAELALRVELFDDEVDT
LQLFDPLTGRVRQKVPRFTVYPSSHYVTPRDTVLRAIETIKDELRDRLDFFYKEGKLVEA
QRLEQRTRFDLEMLQELGFCKGIENYSRHLSGAAPGEPPPTLVDYLPPDALMFLDESHVL
IGQFNGMYNGDRARKENLVNYGFRLPSALDNRPLKFAEYERKMRQAIFVSATPADYEAKR
TGQVVEQVVRPTGLIDPVIDVRPARTQVDDVLSEINKRVAVGERVLVTTLTKRMAEQLTD
YLSDNGVKVRYLHSDIDTVERVEIIRDLRLGAFDVLVGINLLREGLDIPEVSLVAILDAD
KEGFLRSERSLIQTIGRAARNVNGTAILYGDKMTDSMARAIGETERRRAKQMAHNEAHGI
VPQGVKKRIKDIIDGVYDPQDAKAELAEAKEQAHYQDMSEKQLAREIKKLEKQMQEHARN
LEFEKAAKVRDQLLHVKALVFGTDGASEAELGPKL
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgacccctgcggctgaacacgtcctggacgaaagcaagttcctgacgttcccggattcg
ccttaccagctctactgcccattccctgccgccggcgaccagcccgccgccattgcgcag
ttgaccgagggggtggaagacgggcttgcgttccagaccttgctcggcgtaaccgggtcg
ggcaagacgttcacgatggcaaatgtcatcgcgcggcttggccgcccggccattgtcttc
gcccccaacaagacgctcgccgcccagctctattcggagttccgcgaattcttcccgcgt
aatgcggtggagtacttcgtgtcgtactacgactattaccagccggaagcgtatgtgccg
cagcgcgatctgttcatcgagaaggattcgtccgtcaacgaacacatcgagcagatgcgc
ctctcggcaacgaagagcctgctcgaacgccgcgacgtggtgatcgtcgccaccgtctcc
gccatctacggtatcggtaatccgaacgaataccaccagatgattctgacgttgcgccag
ggcgacaagatggggcagcgcgatatcatcgcgcgcctgatcgcgatgcaatacagccgt
aacgagacggattttggacgaggtaccttccgcgttcgcggcgacaccatcgatatcttc
ccggcagagcacgccgaactcgcgttgcgcgtggagttgttcgacgacgaagtcgacacg
ctgcaactcttcgatccgctcacggggcgcgtgcgtcagaaggtgccgcgatttacggtg
tatccgtcctcacattacgtaaccccgcgagatacggtgttgcgcgccatcgagacgatc
aaggacgaattgcgcgaccggctcgatttcttctacaaagaaggcaagctggtcgaggcg
cagcgtctggagcagcgcacccgattcgatctggaaatgttgcaggagctgggcttctgc
aagggcatcgagaactactcgcggcatttgtccggcgcagcgccgggagagccgccgcct
accctcgtcgactatctgccgcccgacgcgctaatgttcctcgacgagtcgcacgtgctg
atcggtcagttcaacggcatgtacaacggcgaccgggcgcgcaaggaaaaccttgtgaac
tacggcttccgtctgccgtcggctttggataaccggccgctcaagttcgccgagtacgaa
cgcaagatgcgtcaggcaatcttcgtctctgccacccctgcggattacgaggcgaagcgt
acggggcaggtggtggaacaggtggtgcggccgaccgggctgatcgacccggtcatcgac
gttcgcccggcacgtacgcaagtagacgacgtgctctcggaaatcaacaaacgtgtggcg
gtgggagagcgtgtgcttgtcaccacgctcacgaagcgcatggcggagcagctcaccgac
tatttgtccgataacggtgtgaaggtccgctatctgcacagcgatatcgataccgtagaa
cgcgtagaaatcatccgcgatttgcgcttgggcgcattcgacgtactcgtcgggatcaac
ttgctgcgtgaggggttggatattccggaagtgtcgcttgtggcaattctcgacgcggac
aaggaaggtttcctgcgttccgagcggtcattgattcagacgatcgggcgggcggcgcgt
aacgtcaacgggacggccattctctacggcgacaagatgacagactcgatggcgcgcgcg
atcggcgaaacggaacgtcgccgcgcgaagcagatggcgcataacgaggcgcatggcatt
gttccgcaaggggtcaagaagcgcatcaaggacatcatcgacggggtctacgatccgcag
gacgccaaggcggaactggctgaagcgaaggagcaggcgcactaccaggacatgtcggaa
aagcaactggcgcgcgagatcaagaagctcgagaagcagatgcaagagcatgcgcgcaat
ctggagttcgagaaagctgcgaaggtgcgcgaccagttgctgcatgtcaaggcgctggtg
ttcggcaccgatggcgcgagcgaggcggaactggggccgaaactctga
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