KEGG   Pandoraea apista: SG18_16545
Entry
SG18_16545        CDS       T03588                                 
Name
(GenBank) single-stranded DNA exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
papi  Pandoraea apista
Pathway
papi03410  Base excision repair
papi03430  Mismatch repair
papi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:papi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SG18_16545
   03430 Mismatch repair
    SG18_16545
   03440 Homologous recombination
    SG18_16545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:papi03400]
    SG18_16545
DNA repair and recombination proteins [BR:papi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     SG18_16545
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     SG18_16545
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      SG18_16545
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB T3SS_ExsE Glyco_transf_4
Other DBs
NCBI-ProteinID: AJE99406
LinkDB
Position
complement(305502..307199)
AA seq 565 aa
MTDIVTRPVDDATAEALSRDGVHPVLARLFAARGVAESAETETALARLIPPTQLKGAQDA
AAFLADAIAAGKRMLVVADYDCDGATACAVAVRGLRMFGAKVEYLVPNRFEYGYGLTPEI
VALAAQGKQGPPDVLITVDNGIASLDGVAAAQTLGIEVVVTDHHLPGNELPNARCIVNPN
QPGCEFPSKHLAGVGVMFYVLLALRAELRARGAFDSREQPRLDTLLDLVALGTVADVVKL
DANNRILVAQGLARMRAGRMHPGINALFRAAARNARQAGSFDLGFGLGPRLNAAGRLADM
SLGIECLLTDDDGRAWALAQELDAMNRERREIEAGMQQEALADLARFDPRAATTLCAFNE
TWHQGVIGIVAARLKEKFYRPTIVFAPGDDGQIKGSGRSIPGFHLRDALDLVTKREPGLI
AKFGGHAMAAGLTIAADALPRFQAAFEAVGQAWLDEKTLSRVIETDGDIGDECFVPPFVA
LLDAQVWGQGFPPPVFSGEFDVLSQAILKDKHLKLQLGRGRMRFNAIWFNHADTLPSRAQ
FAYRLAADTFNGVSRVQMIVEHAQA
NT seq 1698 nt   +upstreamnt  +downstreamnt
atgaccgacatcgtcacccgccctgtcgacgacgcgacggccgaagccctctcgcgcgac
ggtgtccacccggtactcgcccgcctgttcgccgcgcgcggcgtggccgagagcgcagag
accgaaacagccctcgcccgtctgattccccccacgcaactcaagggggcgcaggacgcc
gccgccttccttgcggacgccattgccgccggcaagcgcatgctggtggtggctgattac
gattgcgacggcgcgaccgcgtgcgccgtggccgtgcgcggcctgcggatgtttggcgcc
aaagtcgagtatctggtgccgaaccgcttcgaatacggttacggcctgacgccggaaatc
gtagcgttggccgcgcaaggcaagcaagggccgcccgacgtgctgattacggtcgataac
ggcattgccagcctcgatggcgtggccgccgcgcagacgctcggcatcgaagtcgtggtg
acagatcaccatttgccgggcaacgaattgcccaacgcgcgctgcatcgtcaatccgaac
cagcccggctgcgaatttccgagcaagcatctggccggtgtcggcgtgatgttctacgtg
ctgctcgcgcttcgcgccgaattgcgcgcacgcggtgcgttcgattcacgcgaacagccg
cgtctcgacacgctgctcgatctggtcgcgctgggaacggttgcggacgtcgtcaagctc
gacgccaacaaccgcattctggtggcgcaaggactcgcacggatgcgcgccggtcgcatg
cacccgggcatcaacgcgctctttcgtgcagccgcccgcaatgcccggcaggcgggcagc
ttcgatctgggcttcggtctggggccgcgcctgaacgccgccggacgcctcgccgatatg
tcgctgggcatcgaatgtcttctgacggacgacgacggccgtgcgtgggcgcttgcgcaa
gaactcgacgcgatgaatcgcgaacgccgcgaaatcgaagcgggcatgcagcaggaagcg
ctggccgacctggcacgcttcgatccccgggccgcgaccacgctctgcgcattcaacgag
acgtggcatcaaggcgtgatcgggattgtggctgcgcgtctgaaagagaagttctaccgt
ccgaccatcgtgttcgcccctggtgacgacggccagatcaagggctccggccgctcgatt
ccaggcttccacttgcgcgacgcgctcgatctcgtcaccaagcgcgaaccgggtctgatc
gccaaattcggcggacacgcaatggcggcgggcctcacaattgccgccgacgccctgccg
cgctttcaagccgcgtttgaggcggtcggacaggcgtggctcgacgagaagacgctctca
cgcgtgatcgaaaccgatggcgatatcggcgacgagtgcttcgtgccgccgttcgtcgca
ttgctcgacgcgcaggtgtgggggcaaggctttccgcccccggtgttctcgggcgaattc
gacgtcctctcgcaagccatcctcaaggacaagcatctgaagctgcaactcggtcgtgga
cgtatgcgcttcaatgccatctggttcaatcacgcggacacgttgccaagtcgcgcgcag
ttcgcgtatcgattggcggcggacaccttcaacggcgtctcgcgcgtgcagatgatcgtg
gaacacgctcaggcctga

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