Pandoraea apista: SG18_17220
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Entry
SG18_17220 CDS
T03588
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
papi
Pandoraea apista
Pathway
papi03030
DNA replication
papi03430
Mismatch repair
papi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SG18_17220
03430 Mismatch repair
SG18_17220
03440 Homologous recombination
SG18_17220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
papi03032
]
SG18_17220
03400 DNA repair and recombination proteins [BR:
papi03400
]
SG18_17220
Enzymes [BR:
papi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SG18_17220
DNA replication proteins [BR:
papi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SG18_17220
DNA repair and recombination proteins [BR:
papi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SG18_17220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_18
AAA_14
TsaE
AAA_2
DUF3646
nSTAND3
PIF1
AAA_19
AAA_28
AAA_assoc_2
RsgA_GTPase
Herpes_Helicase
SKI
Glyco_tranf_2_5
Rad17
Motif
Other DBs
NCBI-ProteinID:
AJE99506
LinkDB
All DBs
Position
454529..456421
Genome browser
AA seq
630 aa
AA seq
DB search
MTYQVLARKWRPKGFSTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK
ALNCETGITAQPCGVCKACRAIDEGRFVDYVEMDAASNRGVDEMTSLLEKAVYAPADARF
KVYMIDEVHMLTGHAFNAMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLTNILGEEGIESEPQALRLLAKAAGGSMRDALSLTDQAIAYAAGPLSETAVRGM
LGAIDQSVLVRLLDALKDESRTDLLAVADEMAERSFSFAAGLQDLGSLLHKIALAQYAPQ
AVSDDWPEAADVRRLAEALSPEAVQLYYQIATRARGELGLAPDEYTGFSMALLRMAAFTP
LLAGGTLAEPPTPQATGAARALAPAAAPSRAPMSEPSRAAAPPAATPAQPEARRAPAART
SAPTDGAPMSPARAALAALNAGRKGTAGRAGSGAASANRGSASRASDDAPAGADPEPEPA
GSAAPAPAPAAPPRACVYREADGVAPVFTGEWPALAAELPARGLAQQLAFQSELTEVAGR
ALHLRVPLRQLADAATTDKLRQVLSEHLGVEVQLQVELGQVGTTAASLAAEAAAARQRAA
EQAIADDPLVRELIDEFDAQILPGSIRPVQ
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagtactcgcgcgcaaatggcgccccaaaggcttctcgaccctggtgggc
caggagcatgtcgtgcgtgcgttgacgcacgcgctcgagcaacagcgtctgcatcacgcg
tatttgtttaccggcacgcgcggcgttggcaagaccacgctatcgcgcattctggccaag
gcgctcaattgcgagacggggatcacggcgcagccgtgcggcgtttgcaaggcctgtcgc
gccatcgacgaagggcgtttcgtcgattacgtggaaatggacgcggcgtcgaatcgcggt
gtcgacgagatgacgtcgctgcttgagaaggccgtctacgcaccggcggatgcgcgcttc
aaggtctatatgatcgacgaagtgcacatgctcacgggccacgcgttcaacgcgatgctc
aagacgctggaagagccgcccgcgcatgtcaaattcattctcgcgacgaccgatccgcaa
aagatcccggtcaccgtactttcccgctgcctgcaattcaatctgaagcagatgccggcg
ggacacatcgtgtcgcatctcacgaacattctcggcgaagaaggcatcgagagcgagccg
caagcgttgcgtctgctcgccaaggcggctggcggcagcatgcgcgacgccttgtcgctc
accgatcaggccattgcgtacgcggcggggccgctaagcgagactgccgtgcgcggcatg
ctcggcgcgatcgatcagagcgtgctggtgcgtctgctcgatgccctgaaggacgagtct
cgcaccgacctgctggccgtcgccgacgagatggccgagcgcagtttctcgtttgccgcc
ggattgcaggatctgggcagcttgctgcacaaaattgcattggcgcaatacgcgccgcaa
gcggtttccgacgactggcccgaagcggcggacgtacgccgtctggcggaggcgctgtcg
cccgaggctgtccagctctattaccagatcgccacacgtgcacgcggcgaacttggcctg
gcgcccgacgaatacaccggtttttcgatggctttgctgcgcatggccgcgttcaccccg
ttgctcgcaggcggcacgcttgccgagccgccaacgccgcaagcgacgggtgccgcgcgc
gccttggcacctgccgccgcgccgtcgcgggcgccgatgtcggaaccgtcgcgtgccgct
gcgccacctgcggctacgccggcgcagcccgaggcgcgtcgcgccccggcagcccgtact
agcgcgccgaccgacggtgcgccgatgtcacctgcccgcgccgcactcgccgcgctcaat
gctgggcggaagggcacggcagggcgcgccgggagcggtgccgccagtgcgaaccgtggc
agcgcgtcgcgtgcctcggacgatgcgccggccggtgccgatccagagcccgagcctgcc
ggatcggccgcgcctgcaccagcgcctgccgcgccgccgagagcgtgtgtctatcgtgaa
gccgatggcgtcgcgccagtctttaccggcgaatggccggcattggctgccgaacttccg
gcacgcggcctcgcccagcaactggcgtttcaaagcgagctgacggaagtggcggggcgc
gcgttgcatttgcgcgtgccgttgcgtcaactggccgacgcggccaccaccgacaagctg
cgtcaggtgctctccgagcacttgggcgtcgaggtgcagttacaagtcgaactgggccag
gtcggcacgacggcagcgtcgcttgccgcggaagcggcggcggcgcgtcaacgggcggcg
gaacaggcgattgccgacgatccgctcgtgcgtgaattgatcgacgaattcgacgcgcag
atcctgccgggcagcattcgcccggtacaataa
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