Pandoraea apista: SG18_18315
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Entry
SG18_18315 CDS
T03588
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
papi
Pandoraea apista
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
papi03009
]
SG18_18315
Enzymes [BR:
papi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
SG18_18315
Ribosome biogenesis [BR:
papi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SG18_18315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AJE99665
LinkDB
All DBs
Position
complement(659751..660470)
Genome browser
AA seq
239 aa
AA seq
DB search
MELDRLLQSQGFGSRKMCRKLIQTGAFAIDGVVHDDPRESVDPLGLQFTLDGEPWEYREH
VYVLLNKPEGFECSTSPTHHEGVHSLLPLPLAVRGVQPAGRLDQDTTGMLLLSDDGPFLH
AMMSPRRHIPKRYVATTKHPVTEAMLQALRDGVLLRDETEPLAATDVMSPSPHEIALTIT
QGKYHQVKRMVAAAGNRVEGLVRIAIGGLPMGNLALGEWRYLSPDELLSLPYEAPASRK
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atcgagttagatcgcttactgcaatcgcagggtttcggcagccgcaagatgtgccgcaag
ctcattcagaccggcgctttcgccatcgacggcgtggtgcacgacgatccccgtgaatcc
gtagacccgctgggcctgcaattcacgcttgacggtgagccgtgggaataccgcgaacac
gtctacgtgctgcttaataagcccgagggctttgagtgctccaccagcccgacgcaccac
gaaggcgtgcattccctgctgcccctgccgttggccgtgcgcggtgtgcagccggccggc
cgcctcgatcaggatacgaccggcatgttgctgctctccgacgatggaccgttcctgcac
gccatgatgtcgccgcgccgacacatacccaagcgctatgtcgcaacgaccaagcacccg
gtcaccgaagcgatgttgcaggcattacgcgatggcgttctgctacgcgacgaaaccgaa
ccgctggctgcaacggacgtcatgagcccctcgccgcacgagattgccctgacgattaca
cagggcaaataccatcaggtcaaacggatggtcgcagcggcgggcaatcgggtagagggg
ctggtcagaatcgccatcggcggcctgccgatgggaaatctcgcgctcggcgaatggcgt
tatctgtcgccggacgaactgctgtcgctgccgtacgaagcgccggcctcacgcaaatga
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