Pandoraea apista: SG18_18885
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Entry
SG18_18885 CDS
T03588
Name
(GenBank) hypothetical protein
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
papi
Pandoraea apista
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
papi03009
]
SG18_18885
Enzymes [BR:
papi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
SG18_18885
Ribosome biogenesis [BR:
papi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SG18_18885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AJE99750
LinkDB
All DBs
Position
complement(791961..793787)
Genome browser
AA seq
608 aa
AA seq
DB search
MTRSIGTMSDTPRAKLGAKHPRTLDKTRAPVRSSGALRRATKAVPASMLDANGAKKKPAA
KPARPRPADDAATPAGPRRAADSGAAPRKPATSAAKPYEKRPMGERPPARGQRERVAGAR
PVRFDDESRPRRFDEDRPRRAAEGGARGDYARPAKRGTDDRAPRRFDEDRPRRATEGGAR
GDYARPAKRGTDDRAPRRFDEDRPRRATEGGARSDYARPAKRSTDDRAPRRFDEDRPRRA
TEGGARGDYARPVKRGTDDRAPRRVDEDRPRRATEGGARSDYARPAKRGTDDRAPRRFDE
DRPRRATEGGARSDYARPVKRGTDDRDSHTSRSTRPGRAPRTPRDDDDDIKVHHDAAGSL
RLSKRMSELGLCSRREADEWIAKGWVRVDGKVMTELGTKILPTQEITVVQAARKEQANRV
TILIHKPVGYVSGQAEDGYEPAVVLVTRENHWSEDDAGVRFSPSHLRSLAPAGRLDIDST
GLLVLTQDGRIAKQLIGEDSDIEKEYLVRVSYNEHEQNVEAHFPAERLALLRHGLELDDQ
PLKPAQVEWQNPEQLRFVLKEGKKRQIRRMCELVGLHVTGLKRVRMGRITLGNLPVGEWR
YLRAGEGF
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
attactagaagcattggaaccatgagcgataccccgcgcgccaaactcggcgccaaacac
ccccgcactctcgacaagactcgcgctccggtgaggtcatccggcgcactgcgccgtgcg
accaaagctgtgcctgcgtcgatgctcgacgccaatggtgcaaagaagaagccggcggca
aaaccggcgcgtccgcgtccggcagacgatgccgcgacgccggccggcccacgccgcgca
gccgacagtggcgctgcgccgcgcaaacctgccacgagtgcggccaagccttacgagaag
cgaccgatgggtgagcgtccgccagcgcgtggtcagcgtgaacgcgttgcaggcgcacgt
cccgtacgctttgacgacgagtcgcgtccgcgtcgcttcgacgaagaccgtccgcgccgt
gccgccgaaggcggtgcacgtggcgattacgcccgcccggctaaacgcggcacggatgat
cgggcaccgcgtcgcttcgacgaagaccgtccacgtcgtgctaccgaaggcggtgcacgt
ggcgattacgcccgcccggctaaacgcggcacggatgatcgtgcgccgcgtcgcttcgac
gaagaccgtccacgccgtgctaccgaaggcggcgcacgtagcgattacgcccgcccggct
aaacgcagcacggatgatcgtgcaccgcgtcgcttcgacgaagaccgtccacgccgtgct
accgaaggcggcgcacgtggcgattacgcgcgcccggtcaaacgcggcacggatgatcgt
gcgccacgtcgcgtcgacgaagaccgtccacgccgtgctaccgaaggcggtgcccgcagc
gattacgcgcgcccagccaagcgcggcacggatgatcgtgcgccgcgtcgcttcgatgaa
gaccgtccacgccgcgctaccgaaggcggcgcacgtagcgattacgcccgccccgtcaag
cgcgggactgacgatcgcgacagccatacttcccgctcgacacgccccggtcgcgcaccg
cgaacaccccgcgacgacgacgatgacatcaaggtccatcacgacgctgccgggtcgttg
cgtctgtcgaagcgcatgtcggaacttggcctgtgctcgcgccgcgaagccgatgagtgg
atcgccaaagggtgggttcgtgttgacggcaaggtcatgacggaactcggcacgaagatt
ctgccgacgcaggaaatcaccgtcgtgcaagccgcacgaaaggaacaggccaatcgcgtc
acgatcctgatccacaaaccggttggctacgtctccgggcaagcagaagacggctacgaa
cccgccgtcgtcctggtgacgcgtgaaaaccattggtccgaggacgatgccggtgtgcgt
ttctcgccgtcgcatttgcgcagccttgccccggccggccgcctcgacatcgactccacc
ggcctgctcgtgctgacgcaggacggtcgaatcgccaagcaactgattggcgaagactcg
gatatcgagaaggaatacctcgtgcgcgtgtcgtacaacgaacacgagcaaaacgtcgag
gcgcacttcccggccgagcgtctggccttgctacgccacggcctcgaactcgacgatcag
ccgctcaagcctgcgcaagtcgaatggcaaaatccggagcaattgcgtttcgtgctcaag
gaaggcaagaagcgtcagattcgccgcatgtgcgaactcgtcggcttgcacgtgaccggc
ctcaagcgcgtacgcatgggacgcatcacgctgggtaacctgcccgttggggaatggcgt
tatctgcgcgccggcgaaggattctga
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