KEGG   Pandoraea apista: SG18_19765
Entry
SG18_19765        CDS       T03588                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
papi  Pandoraea apista
Pathway
papi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:papi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SG18_19765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:papi03019]
    SG18_19765
Enzymes [BR:papi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     SG18_19765
Messenger RNA biogenesis [BR:papi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SG18_19765
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22
Other DBs
NCBI-ProteinID: AJE99877
UniProt: A0A5E5PBP3
LinkDB
Position
1004590..1006035
AA seq 481 aa
MSFASLGLIEPLLRNLQELNYKTPTPVQAKAIPAVLGGKDVMAAAQTGTGKTAGFALPLL
QRLVQHGPVVSSNRARVLVLVPTRELAEQVLQSFIEYGKGLDLRFLAAYGGVSINPQMMK
LRKGVDVLVATPGRLLDLNRQNAVQFDQIQTLVLDEADRMLDLGFARELNAVFAALPAKR
QTLLFSATFSDDIRTMAASILRQPVDISVSQPNATASKVKQWVVPVDKKNKPDLFMHLVA
QNRWEHALVFVKTRNGVDYLAAILDEAGYAVDTIHGDKPQPARLRALERFKTGEVSMLVA
TDVAARGLDIDDLPLVINVDLPIVAQDYVHRIGRTGRAGASGVAVSLVCADEAPQLAAIE
ALIRQTLPREEEPGFEAEHRVPQTSATGQIIKKPKKPKKPKGVQAAPGAVPVPAKKPRSQ
NGDNKRKPVTRGATGAGKGASVSGGNPFGAQKPRSKSAGKPATGSRKPAGKSTGGRSKRQ
P
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgtcttttgcctcgcttggcctgatcgagccgttgctgcgcaacttgcaggaactcaat
tacaagacacctacgccggtgcaggccaaggcgatcccggctgttcttggtggcaaggac
gtcatggctgcggcacagaccggcacgggcaaaacggcgggattcgcactgccgctgttg
cagcggctggtgcagcacggaccggttgtgtccagcaaccgtgcgcgggttctggtgctg
gtgccgacgcgagaactcgccgaacaagtgctgcaaagcttcatcgagtacggcaaaggc
ctcgacttgcgatttctggccgcctacggcggtgtgagcatcaatccccagatgatgaag
ttgcgcaaaggcgtggatgtgctcgttgccacgccgggccgtttgctcgacctcaatcgc
cagaacgccgtacagttcgatcagattcagacgctggtactcgacgaggccgaccgcatg
ctggatctggggtttgcgcgcgaactcaatgcggtcttcgctgcgctgcctgcaaagcgt
cagaccctgctgttctctgccacgttttccgacgatatccgcaccatggccgcgagcatt
ctgcgccagccggtcgatatcagcgtgagccagcctaacgccacggccagcaaggtcaag
cagtgggtggtgccggtggacaagaagaacaagcccgatctcttcatgcatctggtggcg
caaaaccgctgggagcatgccctggtgttcgtcaagacacgcaatggcgtggattacctg
gcggccatactggatgaagcgggctatgcggtcgacaccattcacggggacaaaccgcaa
cccgcacgcttgcgcgcgctggagcgcttcaaaacgggcgaagtctccatgctggtcgcc
acggatgtggcggcgcgagggctggatatcgacgacctgccgctagtgatcaacgttgat
ctgccgatcgtggcgcaagactacgtgcatcgtatcgggcgcacaggccgcgcgggcgcc
agcggggtggcggtgtcgctcgtgtgtgccgatgaggcgccgcaattggccgcgatcgaa
gcgctgatccggcaaacgttgccacgagaagaggagccgggttttgaagccgaacaccgc
gtgccgcaaaccagcgcgaccggccaaatcatcaagaagcccaaaaaaccgaagaaaccc
aaaggggtgcaagcggcaccgggcgccgtgccggtgcccgccaagaagccgcgttcgcaa
aacggcgacaacaaacgaaagcctgtaacgcggggcgccacgggggcggggaaaggcgcg
agtgtgtctggtggtaacccgtttggcgcgcaaaagccacgcagcaaatccgccggcaag
cccgcaacgggttcacgtaagcctgcgggaaagtctactggcgggcgtagcaaacgccag
ccctga

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