Pandoraea apista: SG18_23430
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Entry
SG18_23430 CDS
T03588
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
papi
Pandoraea apista
Pathway
papi00061
Fatty acid biosynthesis
papi00071
Fatty acid degradation
papi01100
Metabolic pathways
papi01212
Fatty acid metabolism
papi02024
Quorum sensing
papi04146
Peroxisome
Module
papi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SG18_23430
00071 Fatty acid degradation
SG18_23430
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SG18_23430
09145 Cellular community - prokaryotes
02024 Quorum sensing
SG18_23430
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
papi01004
]
SG18_23430
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
papi04147
]
SG18_23430
Enzymes [BR:
papi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SG18_23430
Lipid biosynthesis proteins [BR:
papi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SG18_23430
Exosome [BR:
papi04147
]
Exosomal proteins
Exosomal proteins of breast milk
SG18_23430
Exosomal proteins of breast cancer cells
SG18_23430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AJF00386
LinkDB
All DBs
Position
complement(1851567..1853540)
Genome browser
AA seq
657 aa
AA seq
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MQERTTFPRLLLAHAATRGARTAYREKDLGIWQSWSWQEAAHEVRMLACALAAAGFRRGD
NLAIVGNNRVRLYWAMTAAQALGGVAVPLYQDAVAAEMIHVLDDAEIDFAIVEDQEQVDK
LLELRERVPRLSTIIYEDPRGLRNYNAAGLLSYADAVAQGRDFNARHPRYFDEAVASVDP
DDTATILYTSGTTGKPKGVCHSHAGLIGAAFHGSTFDRLSPGDEVLSYLPMAWVGDHLFS
YAQALVTGFTVNCPESPDTIATDMREIGPTYYFAPPRVYENVLTQVMIRMEDANRFKRKM
FAHFMTVANRCGAAVLDRRPVPLLDRLQYALGNLCVYGPLRNTLGMSRIRTAYTAGEAIG
PDLFRFYRAIGINLKQFYGQTETCAYVCLQPDREVRFDSVGPVAPGMEIKIADTGEVLVR
GVGLLKEYYKRPDATREALDEAGYFRTGDAGIIDADGHLRIIDRAKDVGKLACGSLFAPK
YIENKLKFFAYIKEAVAFGDGRDGVCAFINIDMDAVGNWAERQSLAYAGYVDLAGNPRVA
ELILGCVDAVNADLAKEPAFSAAQIRRFVILHKELDPDDDELTRTRKVRRAFIAQKYGVL
VDAFYSGKSTQFIETRVKFEDGREGSVSATLTIHSARVVGARAPVDDPAPEKLRCAA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagcggaccactttcccgcgtttattgttggcccatgctgcaacgcgcggcgcc
cgcacggcgtatcgggaaaaagatctggggatctggcaaagctggagctggcaggaggcc
gcgcacgaagtccggatgctggcctgcgcgttggcggcagccgggttcaggcgcggggat
aacctcgctatcgtcggcaacaaccgtgtgcgcctgtactgggccatgacggccgcacaa
gcactgggcggcgtggctgtgccgttgtatcaggacgccgtcgcggcggaaatgatccat
gtgctcgacgacgccgaaatcgactttgccatcgttgaagatcaggagcaggtcgataag
ctgctcgagttgcgcgagcgcgtgccgcgcctgtcgaccatcatctacgaggacccgcga
gggctgcgcaattacaacgccgcaggtttgctgtcttacgctgatgccgtggcgcagggg
cgcgacttcaacgccagacatccgcgctacttcgacgaggcggtcgcgagcgtcgatccc
gacgacacggcaacgattctctacacgtcgggcacgaccggcaaacccaagggggtgtgc
cactcgcacgcaggcctgatcggtgcggcgtttcatggcagcacgttcgacaggctctcc
cctggcgacgaggtgctctcctacctgccgatggcctgggtcggcgatcatctgttctct
tacgcacaggcgctggtgacggggttcaccgtcaattgcccggagtcgcccgacaccatc
gcgacagacatgcgcgagatcggcccgacctattacttcgcaccgccacgcgtttatgaa
aatgtgctgacacaggtgatgatccgtatggaagatgcgaatcgcttcaaacggaagatg
ttcgcgcatttcatgaccgtggcgaaccgttgcggtgcggcggtgctcgaccggcgcccg
gtgccgctcctcgacagactgcaatatgcgctgggcaatctctgcgtctacgggccgctg
cgcaacacgcttggcatgagtcggattcgcacggcatataccgccggggaggccatcggg
ccggatctcttccgcttttatcgcgcaatcggtatcaacctgaaacagttctacgggcag
acggagacgtgtgcctatgtctgcctgcaaccggatcgtgaagtgcgattcgacagcgtg
gggccggtagccccgggcatggaaatcaagattgccgataccggagaagtgctggtgcgc
ggcgtgggattgctcaaggagtactacaaacggcccgacgccacgcgcgaagcgctcgac
gaggccgggtatttccgcacgggcgatgcgggcatcatcgacgcagacggtcatctgcgc
atcatcgatcgcgcgaaagacgtgggcaagctcgcctgcggttcgttgttcgcgccgaaa
tacatcgagaacaaactcaagttcttcgcgtacatcaaggaagcggtcgcatttggagac
ggacgcgacggcgtgtgcgcgttcatcaacatcgacatggacgccgtgggcaactgggcg
gagcggcagagcctcgcgtatgcggggtatgtcgatcttgccggcaatcctcgtgttgcc
gaactgattctggggtgcgtggacgccgtgaacgcggatctcgccaaggagccggccttc
tcggcggcacagattcggcgcttcgtgattctgcacaaggaactggacccggacgacgac
gagcttacgcgcacgcgcaaggtgcgtcgcgcattcatcgcacaaaagtacggcgtgctg
gtcgacgcattttattcgggcaagtcgacgcaattcatcgagacccgcgtgaagttcgaa
gacggacgcgagggcagcgtgagcgccacgctcacgatccattccgctcgcgtggtgggc
gcgcgggcgcctgtcgacgaccctgcgcctgagaaattgcgctgcgccgcctga
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