Pandoraea apista: SG18_23660
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Entry
SG18_23660 CDS
T03588
Name
(GenBank) Fis family transcriptional regulator
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
papi
Pandoraea apista
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
papi03000
]
SG18_23660
Transcription factors [BR:
papi03000
]
Prokaryotic type
Helix-turn-helix
Other families
SG18_23660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
PAS_4
AAA_5
PAS
HTH_23
PAS_8
AAA
AAA_16
Mg_chelatase
PAS_9
AAA_2
AAA_7
HTH_7
HTH_30
DUF6262
AAA_22
TIP49
nSTAND3
NACHT
AAA_3
DUF815
Motif
Other DBs
NCBI-ProteinID:
AJF01304
LinkDB
All DBs
Position
1904484..1906493
Genome browser
AA seq
669 aa
AA seq
DB search
MRKPVIWAVGISKLGELYRDIVPDYAAHADVQIIDKGYEAVIEALERLPAGSVDGIVAAG
SNGAFLRERVALPVVLVKVTGFDVMHALARARRALPSPSPASRIALVSYARPAPEFERFK
SAFHLDIAQHAYFDAHDAEDLVHRLRDEGMEVIVGPGLVTELAERAGLTGVFLYSQDSVR
AAFDTALEVARFGRIEAQRRERLDTVLRHLHEGVAAVDLNGRIEAINASMAGMLGVTVAD
AVGRPLDAIAPALDIARTLETASAELEAIVSMAGKTWVINRIPLLDQGTLTGALLTCQDS
QSFARVDRSLRSRHRPRHLVARYRLDDLIGDSAAMTQVRTLARRYAQTDSTVLVHGESGT
GKELLAQGIHNASRRRDYPFVAINCAAFPETLLESELFGYEDGAFSGARRGGKAGLFETA
HNGTVFLDEIGEMPMPLQTRLLRVLQEREVLRLGATEPVPCDVRVIAATHRDLRQQVAAG
LFREDLYYRLNILRMVLPPLRERMDDLPRLTPLFLERALARAGARMSVDALQASLLPLLA
TYRWPGNVRELENLLERIAVVCADVVDAREIGHARLIEIAPELGVTPSDVSKANNGWKIG
AREPFENGATGRDTGTTAPLSGRARRAAEELDRIHAALAACGGDRSAACEALGISRSTLW
RKLRDTRDG
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagccggtaatctgggcggtgggcatcagcaagcttggcgagttgtaccgtgac
atcgtgccggattacgccgcccacgccgatgtgcaaatcatcgacaagggctatgaagct
gtcatcgaggcactggaacgattgcccgccggcagtgttgacggcatcgttgctgccgga
tcgaacggtgcgtttctgcgcgagcgcgttgctttgcccgtggtgctcgtgaaggtgacc
ggcttcgacgtgatgcacgcactcgcgcgagcccgtcgcgccttgccatccccctcaccc
gcgtcgcgaatcgcgctggtgtcgtatgcacggcctgcgcccgaattcgaacgcttcaag
agcgcctttcacctcgacatagcgcaacacgcctacttcgatgctcacgatgcggaagat
ctggtgcaccggttgcgcgacgaaggcatggaagtcattgtcggccctggcctcgtgacc
gagctggccgagcgggccgggctgacaggcgtgtttctttactcacaggattcggtgcgc
gccgcattcgacaccgcgctcgaagtggcgcgcttcgggcgcattgaagcgcagcgtcgc
gagcggctcgacaccgtgctgcggcacttacacgagggcgtagcggcagtcgatctgaac
gggcgtatcgaggcgatcaatgcttcgatggcaggtatgctcggcgtaacggttgccgac
gccgtcggccggccgctggatgccattgcccctgcgctggatattgcgcgcacgctcgag
accgcgagcgccgaactcgaagccatcgtctcgatggcaggcaaaacgtgggtcatcaat
cgcattccgcttctcgatcagggcacgctgacgggcgcgttgctcacctgccaggactca
caatcgttcgctcgtgtggatcgttcgctgcgttcgcgccatcgcccccgtcatctcgtg
gcacgctatcggctcgacgatctgattggcgattcggcggccatgacacaggtgcgcacg
ctggcgcgccgttatgcgcaaaccgactcgaccgtgctcgttcatggtgagagcggcacc
ggcaaggaactgctcgcccaaggcattcacaacgccagccggcgacgcgattacccgttc
gtcgcgatcaactgcgctgcatttcccgagacgctgctcgagagcgagctgttcggctat
gaagacggcgcattctcgggggcgcgtcgcggcggcaaggcgggattgttcgagactgcg
cacaacggcactgtctttctcgacgagatcggcgagatgccaatgccgctgcaaacgcgt
ctgttgcgggtcttgcaggagcgcgaagtgcttcgtctgggggccaccgagcccgtgccg
tgcgatgtgcgcgtgattgccgccacgcaccgcgatcttcgtcagcaagtcgccgccggc
ctgtttcgtgaagacctgtattaccggctcaatattctgcgcatggtcttgccgccgctg
cgcgaacgcatggacgacctgccgcggctcaccccgctatttctcgaacgtgcactcgcg
cgtgccggggcccgtatgagtgtcgacgcgttgcaggcatcgctgctgccgctgctcgcc
acctatcggtggccggggaatgttcgggaactggagaatctgctggagcgcattgcggtc
gtgtgtgcagacgttgtcgacgcccgggaaatcggccatgcgcgattgatcgagattgcc
cccgagcttggcgtgacaccgtcagatgtttcaaaagcgaacaatggatggaaaatcggg
gcgcgcgagccgtttgaaaacggtgctaccgggagggacactggcacgacggcgcccctg
tcaggccgcgctcgccgcgccgccgaggaactcgaccgcattcacgccgcactggcggcg
tgcgggggtgatcgcagcgccgcctgcgaggcgcttggcatcagccgatcgacactctgg
cgcaaacttcgcgacacgcgagacggctga
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