KEGG   Pandoraea apista: SG18_23925
Entry
SG18_23925        CDS       T03588                                 
Name
(GenBank) DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
papi  Pandoraea apista
Pathway
papi03420  Nucleotide excision repair
papi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:papi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SG18_23925
   03430 Mismatch repair
    SG18_23925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:papi03400]
    SG18_23925
Enzymes [BR:papi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SG18_23925
DNA repair and recombination proteins [BR:papi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SG18_23925
   MMR (mismatch excision repair)
    Other MMR factors
     SG18_23925
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 AAA_12 PcrA_UvrD_tudor AAA_22 DUF6181
Other DBs
NCBI-ProteinID: AJF00458
UniProt: A0A5E5P9W9
LinkDB
Position
complement(1972039..1974360)
AA seq 773 aa
MPDLLANLNPEQLAAVTLPDEPALILAGAGSGKTRVLTTRIAWLIQQGHVGPAGILAVTF
TNKAAKEMQARLGAMLPISTRAMWIGTFHGLCNRMLRAHFRDAGLPQSFQILDQADQLSA
IKRMMKAANVDDEKYPPKNLQYFINNAKEQGLRPHEVEANDAFNQKFVELYTAYQEQCQR
EGVVDFAELLLRCFELLKHNEPLRVHYQSRFRHILVDEFQDTNKLQYAWLKMLAGSNAAV
FAVGDDDQSIYAFRGANVGNMADFEREFRVRHMIKLEQNYRSHGNILDAANALISNNARR
LGKNLRTDAGHGELIRVYEAATDLQEASWLVEEIKALVAQGLSRQDIAILYRSNAQSRVM
EHALVGAGIAYRVYGGLRFFERQEVKHALAYLRLIENPNDDTAFARVVNFPTRGIGARSL
EQLADAARLYNCSMYAAVPYMTGKAGTNLTGFLRLIEQMRQDTARLTLPEVVMHVIEASG
LIAHYQTEKEGQDRIENLQELVHAATAFIAEEGYGLDAPARLIATRPSLPGAPDVLASPD
GVVDADTPVEMTPLAGFLSHASLEAGDNQAEAGQDAVQLMTVHAAKGLEFTAVFVTGLEE
GLFPHENSALELDGLEEERRLMYVAITRAKERLYLSFTQSRMLHGQTRYNVRSRFFEEIP
EEVLKFLTPRAQPGARLGQAEPAWGRDWFSRPQVGATKQDEWVATKSEQALADRSRASET
GFKLGQGVFHTKFGEGKIIGLEGTGVEARAHVKFGRHGEKWLALAVAKLQPIE
NT seq 2322 nt   +upstreamnt  +downstreamnt
atgcccgatctgttagccaatctgaaccccgaacaactggccgccgtgacgctcccggac
gagccagcccttattctcgcgggcgcaggatccggcaagacgcgcgtgctgacgacccgt
atcgcctggctgatccagcagggccacgtgggcccggccggtattctggcggtgaccttt
accaacaaggcggccaaggagatgcaggcgcgtctgggcgccatgctgccgatcagcacc
cgcgccatgtggatcggcaccttccacggcctgtgcaaccggatgctgcgtgcgcatttc
cgcgacgccggactgccacagagcttccagatcctcgatcaggccgatcagctctccgct
atcaagcgaatgatgaaggcggcgaatgtcgacgatgagaagtatccgccgaaaaacctg
caatatttcatcaataacgcgaaggaacaggggctgcgcccgcacgaggtcgaggccaac
gacgccttcaaccagaagttcgtcgagctgtacaccgcctatcaggaacagtgtcagcgc
gagggtgtggtcgattttgccgaactgctgctgcgctgtttcgagctgctcaagcataac
gagcccctgcgcgtgcactaccagtcgcgcttccgccacattctcgtcgacgagtttcag
gatacgaacaaacttcagtacgcctggctcaagatgctcgcgggatcgaatgccgcagtg
tttgccgtgggtgatgacgatcagagcatctacgcgtttcgtggtgccaacgtcggcaat
atggctgacttcgagcgcgaattccgcgttcgtcacatgatcaagctggagcagaactac
cgttcgcacggcaacatcctggatgccgccaacgcgttgatttcgaataacgcacggcgt
ctgggcaagaatctgcgcaccgatgcggggcatggcgaactgatccgggtctacgaagcc
gcgaccgacttgcaagaggcgagctggctcgtggaagagatcaaggcgcttgtcgcgcag
ggtctgtcgcgtcaggacatcgccattctgtatcgcagcaacgcccagtcgcgagtgatg
gagcacgcactggtgggggcgggcattgcgtatcgcgtgtacggcgggctgcgcttcttc
gagcgccaggaagtgaagcacgcgctggcgtacctgcgtctgatcgagaatccgaacgac
gatacggcatttgcccgtgtcgtgaacttcccgacacgcgggatcggcgcacgttcgctt
gagcaactggccgatgcggcgcgtctgtacaactgctcgatgtacgccgccgtgccttat
atgaccggcaaggcgggcaccaatctgacggggttcctgcggttgatcgagcaaatgcgg
caggacaccgcccgcctcacgctgccggaggtcgtgatgcacgtcatcgaggcaagcggg
ttgattgcgcactatcagaccgagaaagaaggtcaggatcgcatcgagaacttgcaggaa
ctggtgcacgccgctacggcgtttatcgcggaggagggctatgggcttgacgcgccggcg
cgtttgatcgccacgcggccctcgctgccgggcgccccggacgtgctggcctcgcccgat
ggtgtagttgacgccgataccccggtggaaatgacaccgctcgccggttttctctcgcat
gcgtcgctcgaggccggggacaatcaggccgaagccgggcaggacgccgtgcaactgatg
acggttcacgcggcgaaggggctggaatttaccgcggtcttcgtcacggggctggaagaa
gggctgttcccccacgaaaacagcgcgctcgaactcgacggtctcgaagaagagcgccgg
ttgatgtatgtggcgatcacgcgagcgaaggagcggctgtatctctcgttcacccaaagc
cgaatgctgcacggccagacgcgctacaacgtgcgttcgcgcttcttcgaggaaattccg
gaggaggtgctgaagttcctgacgccgcgtgcgcagccgggcgcgcgtctggggcaagct
gagccggcatgggggcgcgattggttttcgcgtccgcaggtgggggcgacgaagcaggac
gaatgggtggcaaccaagtcggagcaggcccttgccgaccgttcgcgcgcttcggagacc
ggcttcaagctcgggcagggagtgttccacaccaagttcggtgagggcaagattatcggg
cttgaggggacgggcgtagaagcgcgcgcgcacgtgaaattcggccgccatggtgaaaag
tggctcgcgctggctgtcgccaagctccagccaatcgagtaa

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