Pandoraea apista: SG18_24435
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Entry
SG18_24435 CDS
T03588
Name
(GenBank) transcriptional regulator
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
papi
Pandoraea apista
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
papi03000
]
SG18_24435
Transcription factors [BR:
papi03000
]
Prokaryotic type
Helix-turn-helix
IclR family
SG18_24435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
IclR_C
MarR_2
HTH_24
MarR
TrmB
HTH_29
HTH_5
HTH_20
HTH_23
DUF977
HTH_Crp_2
wHTH-PRTase_assc
Xre-like-HTH
HTH_11
TFIIE_alpha
HTH_AsnC-type
DUF4423
HTH_Cmi2_C
DUF7342
Dimerisation
AbiEi_4
MksE
RP-C
DnaD_N
Penicillinase_R
Motif
Other DBs
NCBI-ProteinID:
AJF01327
LinkDB
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Position
5415192..5415986
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AA seq
264 aa
AA seq
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MGKYPNVRGLSRGLLVLRALNAMERGRATPQQLSDATGLHRTTVRRLLETLLEDGFVRRS
TSDDTFRLALAVRSLSEGFTDDERIATIAPPIMGQLMQRVVWPSDLTTPDGDAMIIRETT
HRFSPLSFHRAMVGRRLPMLFTAAGRAYFGMCPEAEREDILDLLRTGAGGELQQRFASDD
AFIRNLVRQTRENGFGSNHGDWLDQRKIGAVAVAIPSQGRVLASLNVIYLDQAVSPAEAV
RRFVPPLQEAAAQMAAAVAPAEPD
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatatccaaacgtgcgcggcctgtcgcgtggcttgctggtgcttcgggcgctc
aatgcaatggagcgcggccgcgcaacgccgcagcagttgagcgacgcgacggggcttcac
cgcaccaccgtgcgccgattgctggagacattgctggaagacggattcgtgcgacgcagc
acttccgacgacaccttccgtctggcgctcgcggtgcgctcgctcagcgagggcttcacg
gacgacgaacgcatcgcgacgatcgcgccgccgatcatggggcagttgatgcagcgcgtg
gtgtggccttcggatctgaccacgcccgacggcgacgccatgatcatccgcgagacgacc
catcgtttcagcccgttgtcttttcaccgcgccatggttggccggcgcttgccgatgctg
ttcacggctgccggacgcgcgtatttcggcatgtgtccggaggccgagcgcgaggatatt
ctcgatttgctgcgaacgggcgcgggcggggagttgcagcagcgtttcgccagcgacgat
gcgttcatccgcaatctcgtgcgtcagacacgcgagaatggcttcggctcgaatcatggg
gactggctcgaccagcgcaagatcggcgcggtggcggtcgccatcccgtcgcagggacgt
gtgctggcaagcctgaacgtgatctatctcgaccaggccgtgagcccggccgaggccgtg
cggcggttcgtaccgccgctgcaggaggcggcggcacagatggcggcggcagtggcgccg
gccgagcccgattga
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