Pandoraea apista: SG18_24550
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Entry
SG18_24550 CDS
T03588
Name
(GenBank) ABC transporter permease
KO
K02053
putative spermidine/putrescine transport system permease protein
K02054
putative spermidine/putrescine transport system permease protein
Organism
papi
Pandoraea apista
Pathway
papi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SG18_24550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
papi02000
]
SG18_24550
Transporters [BR:
papi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
SG18_24550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
PARM
Motif
Other DBs
NCBI-ProteinID:
AJF00547
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Position
5388211..5390013
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AA seq
600 aa
AA seq
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MSASAVVRPSSSSPVQPAPRRSRWRARLRPMLMAAPIVILLTVMLIYPVGQLLLLSVRGE
GGFTLAEYQRLFASSVYVEVLLITLKVSLYTTFFAVLTGYPIAYRLSTLTGARKQRLLFW
LLVSFWTSFLVRTFAWVVLLGRNGVVNRTLLDLGLIDAPLSLLYSFPAVILGMVHALMPL
AVLTMLSVMENIDRRLPSAASTLGARPGTVFWRVYFPLSLPGVAAGALMVFVTSIGFFIT
PTLLGGRHETMITQLIIDQVMQALNWGFAGAISVLLLAVVLVVFLVYDRMVGLSTMAGGA
GDVKAGKRRGGWSRTLGEKVLGALGSATDVMLRAMPRHQGEQGDGLVLRVIVFLLVVFLA
APALLMIPVSFDSASALAWPPKGFSLQWYQQVWDSPLWMQAITRSMLVGIGAGLLSMLIG
TPAAFLLVRGGMRGKSAMLAFVLAPIVVPRMILAVGVFYFFAKIGLVGSNVGLTIAHTVV
AVPYVVITMMAVLRNYDTRLDLAAYSLGARPWATLRRVTFPILGAGLLSSFLFAFATSFD
ELTIALFTSGGLSTTLPKQFWDELTMQISPVIAAVSTCLFLFIAALIWVAERLRRRSLAT
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcatccgccgtggttcgcccttcgtcgtccagtcccgttcagccggcgccgcgc
cggtcgcgttggcgcgctcgcctgcgtcctatgctcatggccgcgccgatcgtgattttg
ctgacggtcatgctgatctatccggtcggtcagttgctgttgctgagcgttcgcggcgaa
gggggcttcacgctcgccgaatatcagcgcctgttcgcctcgtcggtgtatgtcgaggtg
ttgctcatcacgctcaaggtctcgctctacacgaccttcttcgcggtactcacgggttat
ccgattgcctaccggctttcgacgctcaccggcgcgcgcaagcagcgcctgctcttctgg
ctgctggtctcgttctggaccagcttcctcgtgcgtacgtttgcgtgggtggtgctgctc
gggcgcaacggggtcgtcaaccgcacgttgctcgatctcggcctgatcgacgcgccgctc
tcgctgctctacagcttccccgccgtgattctcggcatggtgcatgcgctcatgccgctg
gccgtgctcacgatgctctccgtcatggagaacatcgatcgccgtctgccgagtgcagca
tcgacactgggggcgcgtccgggcacggtgttctggcgtgtgtacttcccgctgtcgctg
ccaggcgtggcggcgggtgcgctgatggtgttcgtcacgtcgatcggcttcttcattacg
ccgacactgctgggcgggcggcatgaaaccatgattacgcagctcatcatcgatcaggtg
atgcaagcgttgaactggggctttgccggtgcgatttcagtgctgctgctggccgtggtg
ctcgttgtgttcctcgtctacgaccgcatggtcggcctgtcgacgatggcgggcggcgca
ggcgacgtgaaagcgggcaagcgtcgcggtggctggagccgcacgctcggcgagaaggtt
ctcggtgcgctgggcagcgccaccgacgtcatgctgcgcgcaatgccgcgtcatcagggc
gagcagggcgacggactcgtgctgcgcgtgatcgtcttcctgctggtggtgttcctcgcc
gccccggcgctgctgatgattccggtgtcgttcgattcggcctcggcactggcgtggccg
ccgaagggtttctcgctgcagtggtaccagcaggtctgggattcgcccctgtggatgcag
gcaatcacgcgctccatgctggttggcattggcgccggtctgctgtcgatgctgattggc
acgccggccgcgttcctgctggtgcgcggcggcatgcgcggcaagtcggcgatgctcgcc
ttcgtgctggcccccattgtggtgcctcgcatgattctggccgtcggcgtgttctatttc
ttcgccaagatcggtctggtgggctcgaatgtcgggctgaccatcgcgcatacagtggtg
gctgtgccgtacgtcgtcatcaccatgatggcggtgctgcgcaactacgacacgcgtctc
gatctggcggcttacagcctgggggcgcgtccgtgggccacgctgcgccgcgtaacgttc
ccgattctcggcgcgggcctgctgtcgtcgttcctgttcgcgttcgccacgtcgttcgac
gaactcacgattgcgctgttcacgtcgggcggcctctcgaccacattgcccaagcaattc
tgggatgagttgacgatgcagatttcgccggtgatcgctgccgtctccacgtgcctgttc
cttttcatcgccgcactgatctgggtggccgagcgtttgcgccggcgcagccttgcgacc
tga
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