Pandoraea apista: SG18_25015
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Entry
SG18_25015 CDS
T03588
Name
(GenBank) ethanolamine utilization protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
papi
Pandoraea apista
Pathway
papi03030
DNA replication
papi03430
Mismatch repair
papi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SG18_25015
03430 Mismatch repair
SG18_25015
03440 Homologous recombination
SG18_25015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
papi03032
]
SG18_25015
03400 DNA repair and recombination proteins [BR:
papi03400
]
SG18_25015
Enzymes [BR:
papi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SG18_25015
DNA replication proteins [BR:
papi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SG18_25015
DNA repair and recombination proteins [BR:
papi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SG18_25015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AJZ74754
LinkDB
All DBs
Position
2487192..2488904
Genome browser
AA seq
570 aa
AA seq
DB search
MVNEVQEVPEFAVEDASAQVASEVMDPDALARSLPAPMVFVDLETTGGNALEDRITEIGV
VEVGPHGVEQWSTLLDPAEPIPPFIQQLTGITNEMVRGQPSFATLAEGLAERLHGKLFVA
HNARFDYGFLKNEFRRAGISFQADVLCTVRLSRLLFPSAARHGLDALIARFGLTPLGRHR
ALADADLLWQFWQKLHTIYAPDLIGQAVQRVTKRSSQPPQLPDEAIDALPDSPGVYLFYG
EGDTLLYVGKSVDIRSRVRSHFSSDHQVAKDLRISQEIRRVEARQTTGELGALLLESQLV
KQLQPVHNRQLRRTSSLYSWQLAADSDTPQLVSAKTVDFASAEALYGTFSSRASAESALR
ALADEHRLCCAQLGLEKAAGGRPCFGYQVKRCDGACVGDVPLAAHTARVREALTTLQLDT
WPYDGPIAIEEHGTGTRADDVEYHVIDRWQYLGSVTSREALDTLVDSMPAVTGFDPDIYR
LLGRRLAASRQASDPAATDTAVLPSPGPTPTPARRAHTPLVVLQLSRPAFRLSPVEPPEK
PPSKRAVALLRRRQPRPEDPAQIRLPFDAH
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacgaggttcaggaagtgcccgaattcgctgtcgaggacgccagcgcacaagtc
gcgtccgaggtcatggacccggatgcccttgcccgctccctgcccgcaccgatggtcttc
gtcgatctggagacgaccggcggcaatgccctcgaggaccgcatcactgagatcggcgtt
gtcgaagtcggcccgcacggtgtcgaacaatggagcactttgctggatccggccgaacca
attccgccgttcatccagcaattgacggggatcaccaacgagatggtgcgcggtcagccg
tcgttcgcaacgttggcggaaggactggcggaacgcctgcacggcaagctgttcgtcgcc
cacaatgcgcgcttcgactacggctttctcaagaacgagttccggcgcgccggcatcagc
tttcaggcggacgtactttgcacggtgcgactctcgcgtctgctgtttccctcggcggcc
cgtcatgggctggacgccctgattgcacgcttcggcctcacccctctgggccgccaccgc
gcgctcgcggacgccgatctgctctggcaattctggcagaaactccacacgatttatgcg
cccgatctgatcggccaagctgtgcagcgggtcaccaaacgctcgagccagccgccgcag
ttgccggacgaagcgatcgacgcactgcccgacagtcccggcgtttatctcttctacggc
gaaggcgacacactgctttacgtcggcaagagtgtcgatatccggtcacgcgtgcgctcg
catttttccagcgatcaccaagtcgcaaaggacttgcgcatctcgcaggaaatccgccgc
gttgaggcgcgccaaaccacaggtgaactgggtgcgttgctgttggaatcgcaattggtc
aagcaattgcagccggtgcataaccgtcagttgcgtcgcacatcgagtctctatagttgg
caactcgcagccgatagcgacaccccccaactcgtgagcgcgaagacggtcgacttcgcc
agtgccgaagcgctgtatggcaccttctcgtcgcgcgcgagtgccgagagtgcgcttcgg
gcgctggccgacgagcatcgtctatgctgcgcgcaactcgggctcgagaaagcggcgggc
ggacgtccctgctttggctatcaggtcaaacgatgcgacggcgcgtgcgtaggcgatgtg
ccgcttgccgcacataccgcgcgggtgcgcgaagcgctcaccaccctgcaactcgacacc
tggccctacgatggccccatcgcgattgaagaacacggcaccgggactcgcgccgacgac
gtggaataccacgtcatcgaccgttggcaatatctcggcagcgtgacatcccgcgaggca
ctggacactctggtcgacagcatgccggcggtgacgggcttcgatcccgacatctatcgt
ttgctgggccggcgcctcgcggcgtcgcggcaggcgagcgatccggctgcgaccgacact
gccgtcctgccgtcgcccgggcccacccccacccccgcacgccgcgctcacaccccgttg
gtcgttctgcaactcagccgcccggcgtttcgcctgagtcctgtcgagccgccggagaag
cctcccagcaaacgtgcagtggcgttgttgcgccgccgccaaccccgtcctgaagacccc
gcgcagattcgtctgccgttcgacgcccactga
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