Pandoraea apista: SG18_26250
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Entry
SG18_26250 CDS
T03588
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
papi
Pandoraea apista
Pathway
papi03420
Nucleotide excision repair
papi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SG18_26250
03430 Mismatch repair
SG18_26250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
papi03400
]
SG18_26250
Enzymes [BR:
papi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SG18_26250
DNA repair and recombination proteins [BR:
papi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SG18_26250
MMR (mismatch excision repair)
Other MMR factors
SG18_26250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
AJZ74837
LinkDB
All DBs
Position
5245125..5246927
Genome browser
AA seq
600 aa
AA seq
DB search
MSRIPFTNEQRAVINSTASRVCVSACAGSGKTSTLCERVRRLLDRGVRPEHILVLSFSTQ
SVSVLKERLPPEVAAKTFHAFGYDIVRSRKSASSQPLALLTPSGGLLLLKLAIKRCPKAR
RSVKQKTGVNLAAHYEAGRLADFIKRSNGSDELAARLACDSDSGFSDYATVLAELRAIRL
AYDKLVLRVGAIDYPAMIRRAIGALGSANLPYRHVLVDEAQDMSAEQATLLAAIAEHVPN
TMLFGDLMQAVYGFVGGKMPDFRNVLTDAATLGLTQSFRLTHESAALANAVSGEGHGRVR
GSRHGVTPSLVKCTTAFAQEDAVVNLIRRLIDQGIGADRIAVLGRTKAQVRLVEQALLVS
GLETNCGFSERQYAHVIKTLNVLQLLQKCVATAKAGCKPNPKWRALRLRQIVGADVPNAK
VSSCVRLLAKSARIPSFEGRYVMAMRIYLSLAKAARIAPNNLSAELGRWQPVARMVSNVH
EMRARVRTLTRQRRVVTSTIHGAKGGEWDHVIVLGVTDGSIPFYREMKRGEIAEEQRLFY
VAVTRAREQVHLFHAPFHHAPSRQTFEQLSQFLTAKVAVVLEIPERKHRETQRRKVSFSE
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaattccgttcacaaacgaacaacgggcggtcatcaactcgacagcttcgcgc
gtatgcgtatcggcttgcgccggtagcggcaagactagtacgctctgcgagcgagttcgt
cgtctccttgaccgtggagttcgcccggagcatatcctggtgctgagcttctccacgcaa
tctgtcagtgtcttgaaagagcgccttccgcccgaagtcgcggcgaaaaccttccatgct
ttcggttacgacattgtgcgcagccgaaaatcggcctcatctcagccgcttgccctactg
acgccgtccggtggtcttcttctcttgaagctggccatcaagcgctgcccgaaagctcgt
cgcagcgtcaagcaaaagaccggtgtcaatttggcggcgcattatgaagcgggtcggctc
gctgacttcatcaagcggagcaacggtagtgacgaactcgctgctcgcttggcttgcgac
agtgattctggcttttccgactacgccactgtcttggccgagcttcgcgcaattcgcctt
gcctatgacaagctggtgttgcgcgtcggtgccatcgattacccggcaatgatccgtcgg
gccattggtgcgctcggttctgcgaacctgccgtaccgacatgttctggtcgatgaggct
caggatatgagtgcagagcaggcgacgcttctcgccgccattgccgaacatgttccgaac
acgatgctgttcggcgacctgatgcaagcggtgtacggctttgtcggcggaaaaatgccc
gatttccgtaatgtgcttactgatgctgcgacactgggactcacgcagtcgtttcgtctt
acccacgagagcgcggctttggcgaacgctgtgtcaggggaaggtcacgggcgcgtgcgc
gggagccgtcacggtgtcacgccgtcacttgtcaagtgcaccactgctttcgctcaagaa
gatgccgtcgtcaatctgatcagacggctgattgatcagggcattggtgctgaccgaatt
gcggttctcggccggacgaaggcgcaggtccggttggtcgagcaagccctgctcgtgtcg
ggactagaaacgaactgcgggtttagcgaacgccagtatgcgcacgtgatcaagacgctc
aatgttctgcagttgctgcagaaatgcgttgctacggcgaaagctggctgcaagccgaat
cccaagtggcgagcgctgcgcctgcgtcagatcgtgggagctgatgtgcctaatgcgaag
gtcagttcctgcgttcgattacttgcgaagtcggctcgcatcccgtcgttcgaagggcgc
tacgtgatggcgatgcgcatctatcttagcctcgcgaaagcggcgcgcatcgctccgaac
aatttgtctgccgagcttggccgctggcagccggtggcccgtatggtcagcaacgtacac
gaaatgcgagccagagttcgcacgctgacgcgccagcgacgagtagtcacgtcgacgatc
cacggcgcaaaaggcggcgagtgggatcacgtcattgttctcggcgtgacggatggctca
atcccgttctatcgggaaatgaagcgcggtgagatagccgaagaacagcgcttgttctac
gttgcagttacgcgcgctcgggagcaggtccatctgtttcacgcaccctttcatcacgcg
ccgtcaagacaaacttttgagcagctttcgcagttcctgacggcgaaggtcgccgttgta
ctcgaaatacccgagcgaaagcatcgagagacacagcggcgcaaagtcagcttttccgaa
taa
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