Proteus appendicitidis: QQS39_00965
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Entry
QQS39_00965 CDS
T09947
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
papp
Proteus appendicitidis
Pathway
papp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
papp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QQS39_00965 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
papp03021
]
QQS39_00965 (rpoA)
03400 DNA repair and recombination proteins [BR:
papp03400
]
QQS39_00965 (rpoA)
Enzymes [BR:
papp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QQS39_00965 (rpoA)
Transcription machinery [BR:
papp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QQS39_00965 (rpoA)
DNA repair and recombination proteins [BR:
papp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QQS39_00965 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
WIV88622
LinkDB
All DBs
Position
181722..182711
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVKVHGKDEVILTLSKSGIGPVIAADIIHDGD
VEIVKPQHVICHLTDENASINMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEESIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggttgatatcgagcaagtcagt
tcgacgcacgccaaggtgacccttgaaccattagagcgaggcttcggccatactcttggt
aacgcactgcgccgtattctgctttcgtctatgccgggttgtgcggtaacagaggttgag
attgatggtgtactgcatgagtacagcaccaaagaaggtgttcaggaagatatcctagaa
atactgctcaaccttaaagggttggcggtaaaagttcatggtaaagatgaagttattctt
actttgagcaaatctggcattggccctgttattgcagccgatatcatccatgacggtgat
gtcgaaatcgtcaagccgcagcacgttatctgccaccttacagacgagaacgcatctatt
aatatgcgtatcaaagttcagcgtggtcgtggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgccctatcggtcgccttttagtagacgcgtgctatagcccagtt
gagcgtattgcttataatgtggaagcagctcgtgttgaacagcgtaccgacttggataag
ctggttatcgagatggaaactaacggtactatcgatccagaagaatcgattcgccgtgca
gcgactatcctggctgaacagcttgaagcttttgttgacttacgtgatgttcgtcaacca
gaagttaaagaagagaagccagaattcgatcctatcttactgcgcccagtagacgatctt
gaattgactgtccgctctgctaactgtctgaaggcagaagcaatccactacatcggtgat
ctggtacagcgtactgaagttgaattacttaagacgcctaaccttggtaagaaatctctt
actgagattaaagacgtactggcgtcgcgtggtttatctctgggcatgcgccttgagaat
tggccacctgcaagtatcgctgatgaataa
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